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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
192.6
nTPM
FANTOM5:
618.2
Scaled Tags Per Million
Pig:
145.9
nTPM
Allen mouse:
3.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
192.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 141.9
2301
Female, age 85, both hemispheres
205.4
2188
Female, age 91, both hemispheres
146.0
2090
Male, age 80, both hemispheres
118.4
1984
Male, age 76, both hemispheres
97.8
Dorsal cochlear nucleus nTPM: 122.6
2187
Female, age 91, both hemispheres
151.0
2802
Male, age 74, right hemisphere
133.7
2058
Male, age 76, both hemispheres
113.4
2378
Male, age 80, both hemispheres
109.7
2370
Male, age 61, both hemispheres
105.3
Dorsal tegmental nucleus nTPM: 185.5
2358
Male, age 61, both hemispheres
305.1
2083
Male, age 80, both hemispheres
163.3
1936
Male, age 76, left hemisphere
144.2
2326
Male, age 74, both hemispheres
129.5
Dorsolateral tegmental area nTPM: 141.8
2337
Male, age 61, both hemispheres
171.3
2141
Male, age 76, both hemispheres
154.5
2751
Female, age 85, both hemispheres
143.4
2654
Male, age 80, both hemispheres
124.3
2360
Male, age 74, both hemispheres
115.4
Kolliker-Fuse nucleus nTPM: 173.9
2793
Female, age 91, left hemisphere
186.3
2315
Male, age 76, right hemisphere
177.7
2163
Male, age 80, both hemispheres
157.8
Lateral lemniscal nuclei nTPM: 113.9
2169
Male, age 76, both hemispheres
141.7
2453
Male, age 74, right hemisphere
115.8
2746
Female, age 85, left hemisphere
114.2
2320
Female, age 91, left hemisphere
104.1
2036
Male, age 80, both hemispheres
93.8
Lateral parabrachial nucleus nTPM: 133.1
2139
Female, age 85, right hemisphere
155.5
2792
Male, age 76, both hemispheres
144.8
2013
Male, age 80, both hemispheres
126.3
2790
Male, age 61, both hemispheres
105.9
Lateral vestibular nucleus nTPM: 142.3
2311
Male, age 80, both hemispheres
151.4
2184
Male, age 76, both hemispheres
133.2
Locus coeruleus nTPM: 152.4
2720
Male, age 74, both hemispheres
189.0
2788
Male, age 74, unknown
187.6
2123
Female, age 91, both hemispheres
148.7
2014
Male, age 55, unknown
147.8
1980
Male, age 76, both hemispheres
143.3
2162
Male, age 80, both hemispheres
134.5
2317
Female, age 72, unknown
115.7
Medial parabrachial nucleus nTPM: 149.7
2854
Male, age 80, both hemispheres
226.4
2170
Female, age 91, both hemispheres
143.2
2786
Male, age 76, both hemispheres
139.7
2156
Male, age 61, both hemispheres
139.6
2463
Female, age 85, right hemisphere
99.8
Medial periolivary nuclei nTPM: 130.3
2791
Male, age 74, right hemisphere
155.0
2171
Female, age 85, both hemispheres
151.3
2063
Male, age 76, both hemispheres
124.2
2458
Female, age 91, both hemispheres
121.4
2081
Male, age 80, both hemispheres
99.5
Motor facial nucleus nTPM: 149.5
2697
Female, age 85, both hemispheres
239.7
2365
Male, age 74, right hemisphere
187.0
2327
Male, age 80, both hemispheres
135.8
2062
Male, age 76, both hemispheres
129.1
2795
Female, age 91, both hemispheres
113.2
2126
Male, age 61, both hemispheres
92.1
Motor trigeminal nucleus nTPM: 115.2
2335
Male, age 61, both hemispheres
140.6
2309
Male, age 76, both hemispheres
120.4
2321
Female, age 91, both hemispheres
115.7
2079
Male, age 80, both hemispheres
107.1
2560
Male, age 74, both hemispheres
92.2
Nuclei of the trapezoid body nTPM: 114.9
1983
Male, age 76, both hemispheres
144.6
2166
Male, age 80, both hemispheres
123.3
2159
Male, age 61, both hemispheres
114.2
2735
Female, age 85, both hemispheres
111.4
2368
Female, age 91, both hemispheres
81.0
Nucleus raphe magnus nTPM: 137.6
2172
Female, age 85, both hemispheres
184.1
2160
Male, age 61, both hemispheres
150.8
2328
Male, age 80, both hemispheres
143.1
2455
Male, age 74, both hemispheres
136.6
2051
Male, age 76, both hemispheres
115.5
2459
Female, age 91, both hemispheres
95.8
Paramedian reticular nucleus nTPM: 138.1
2313
Male, age 61, both hemispheres
147.6
2050
Female, age 85, both hemispheres
145.2
2052
Male, age 76, both hemispheres
141.7
2057
Male, age 80, both hemispheres
117.8
Pedunculopontine tegmental nucleus nTPM: 192.6
2338
Male, age 61, both hemispheres
268.2
2334
Male, age 80, both hemispheres
173.2
1921
Female, age 85, both hemispheres
136.4
Pontine nuclei nTPM: 121.2
2787
Female, age 85, both hemispheres
165.6
1863
Male, age 55, unknown
134.9
2454
Male, age 74, left hemisphere
119.8
2109
Female, age 72, unknown
118.7
1968
Male, age 76, left hemisphere
118.6
2319
Female, age 91, both hemispheres
108.8
2727
Male, age 61, right hemisphere
104.6
2115
Male, age 80, left hemisphere
98.6
Pontine raphe nucleus nTPM: 147.2
2853
Male, age 76, midline
157.8
2122
Female, age 85, midline
136.6
Posteroventral cochlear nucleus nTPM: 121.8
2341
Male, age 80, both hemispheres
157.4
2752
Female, age 85, both hemispheres
127.7
2070
Male, age 76, both hemispheres
122.8
2135
Female, age 91, both hemispheres
104.9
2371
Male, age 61, both hemispheres
96.0
Principal sensory trigeminal nucleus nTPM: 123.0
2324
Male, age 76, both hemispheres
156.5
2367
Female, age 91, left hemisphere
124.9
2158
Male, age 61, both hemispheres
118.1
2008
Male, age 80, left hemisphere
92.6
Reticular pontine nucleus, caudal nTPM: 119.3
2092
Male, age 76, both hemispheres
127.7
2457
Female, age 91, both hemispheres
127.7
2332
Male, age 80, right hemisphere
124.4
2559
Male, age 74, both hemispheres
97.6
Reticular pontine nucleus, oral nTPM: 138.3
2366
Female, age 91, both hemispheres
164.3
2167
Male, age 76, both hemispheres
157.0
1939
Male, age 80, both hemispheres
153.0
2012
Female, age 85, both hemispheres
119.3
2361
Male, age 74, both hemispheres
97.7
Reticulotegmental nucleus nTPM: 141.9
2322
Female, age 91, both hemispheres
160.6
2325
Male, age 76, both hemispheres
154.9
2333
Male, age 80, both hemispheres
143.9
2452
Male, age 74, both hemispheres
108.0
Spinal trigeminal nucleus, oral nTPM: 130.4
2164
Male, age 80, both hemispheres
159.2
2737
Female, age 85, both hemispheres
121.7
1978
Male, age 76, both hemispheres
110.4
Subcoeruleus area nTPM: 137.2
1958
Male, age 80, both hemispheres
191.6
2323
Female, age 91, left hemisphere
146.7
2369
Female, age 85, left hemisphere
125.4
2451
Male, age 74, both hemispheres
114.7
2089
Male, age 76, left hemisphere
107.9
Superior olive nTPM: 122.1
2329
Male, age 80, right hemisphere
136.9
1875
Female, age 85, both hemispheres
134.7
2364
Male, age 74, right hemisphere
128.3
2020
Male, age 76, both hemispheres
114.5
2561
Female, age 91, both hemispheres
96.2
Ventral periolivary nuclei nTPM: 141.8
2165
Male, age 80, both hemispheres
179.1
2130
Female, age 85, both hemispheres
154.5
2023
Male, age 76, both hemispheres
134.5
2794
Female, age 91, left hemisphere
99.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 148.8
2840
Female, age 85, both hemispheres
246.4
2359
Male, age 61, both hemispheres
158.9
1959
Male, age 76, both hemispheres
158.5
2161
Male, age 80, both hemispheres
130.6
2449
Male, age 74, both hemispheres
123.7
2456
Female, age 91, both hemispheres
74.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
145.9
Pig sample
Sample description
nTPM
Pons nTPM: 145.9
Samples: 4
Max nTPM: 180.1
Min nTPM: 112.0
Sample A
Female
130.8
Sample B
Female
112.0
Sample C
Male
180.1
Sample D
Male
160.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
