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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
757.8
nTPM
Monaco:
557.7
nTPM
Schmiedel:
246.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
757.8
HPA sample
nTPM
gdT-cell nTPM: 486.2
Samples: 6
Max nTPM: 582.4
Min nTPM: 365.1
P10809_1007
365.1
P10809_1022
552.2
P10809_1041
582.4
P10809_1060
496.3
P10809_1077
465.9
P10809_1098
455.0
MAIT T-cell nTPM: 475.1
Samples: 6
Max nTPM: 626.6
Min nTPM: 335.4
P10809_1006
335.4
P10809_1024
626.6
P10809_1043
452.4
P10809_1062
474.1
P10809_1083
436.1
P10809_1097
525.9
Memory CD4 T-cell nTPM: 550.0
Samples: 6
Max nTPM: 727.8
Min nTPM: 391.4
P10809_1014
391.4
P10809_1026
727.8
P10809_1045
630.9
P10809_1064
528.3
P10809_1086
496.7
P10809_1113
525.1
Memory CD8 T-cell nTPM: 549.5
Samples: 5
Max nTPM: 733.6
Min nTPM: 369.3
P10809_1012
369.3
P10809_1027
733.6
P10809_1046
563.7
P10809_1065
532.1
P10809_1111
548.9
Naive CD4 T-cell nTPM: 524.0
Samples: 6
Max nTPM: 678.7
Min nTPM: 374.3
P10809_1015
374.3
P10809_1030
678.7
P10809_1049
650.3
P10809_1068
485.3
P10809_1085
463.2
P10809_1112
492.0
Naive CD8 T-cell nTPM: 512.1
Samples: 6
Max nTPM: 672.7
Min nTPM: 384.8
P10809_1016
384.8
P10809_1031
672.7
P10809_1050
514.5
P10809_1069
575.2
P10809_1087
476.2
P10809_1110
449.3
T-reg nTPM: 757.8
Samples: 6
Max nTPM: 997.9
Min nTPM: 511.3
P10809_1018
511.3
P10809_1037
997.9
P10809_1056
741.8
P10809_1075
769.9
P10809_1094
716.3
P10809_1106
809.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
557.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 366.4
Samples: 4
Max nTPM: 523.6
Min nTPM: 283.0
RHH5202_R3573
340.4
RHH5230_R3602
283.0
RHH5259_R3631
318.5
RHH5288_R3660
523.6
Effector memory CD8 T-cell nTPM: 349.3
Samples: 4
Max nTPM: 407.2
Min nTPM: 258.8
RHH5203_R3574
407.2
RHH5231_R3603
381.8
RHH5260_R3632
349.5
RHH5289_R3661
258.8
MAIT T-cell nTPM: 338.5
Samples: 4
Max nTPM: 486.7
Min nTPM: 256.5
RHH5233_R3605
309.3
RHH5205_R3576
256.5
RHH5262_R3634
301.5
RHH5297_R3663
486.7
Memory CD4 T-cell TFH nTPM: 413.4
Samples: 4
Max nTPM: 616.0
Min nTPM: 252.8
RHH5300_R3666
416.0
RHH5236_R3608
616.0
RHH5265_R3637
252.8
RHH5208_R3579
368.8
Memory CD4 T-cell Th1 nTPM: 405.9
Samples: 4
Max nTPM: 682.1
Min nTPM: 278.5
RHH5210_R3581
322.7
RHH5302_R3668
682.1
RHH5238_R3610
340.2
RHH5267_R3639
278.5
Memory CD4 T-cell Th1/Th17 nTPM: 401.9
Samples: 4
Max nTPM: 608.0
Min nTPM: 256.7
RHH5303_R3669
608.0
RHH5211_R3582
395.1
RHH5239_R3611
256.7
RHH5268_R3640
347.7
Memory CD4 T-cell Th17 nTPM: 316.0
Samples: 4
Max nTPM: 369.9
Min nTPM: 234.8
RHH5304_R3670
368.7
RHH5212_R3583
369.9
RHH5240_R3612
290.7
RHH5269_R3641
234.8
Memory CD4 T-cell Th2 nTPM: 372.7
Samples: 4
Max nTPM: 456.4
Min nTPM: 284.5
RHH5305_R3671
424.9
RHH5213_R3584
324.8
RHH5241_R3613
456.4
RHH5270_R3642
284.5
Naive CD4 T-cell nTPM: 366.9
Samples: 4
Max nTPM: 495.8
Min nTPM: 251.0
RHH5306_R3672
462.9
RHH5214_R3585
495.8
RHH5242_R3614
251.0
RHH5271_R3643
257.7
Naive CD8 T-cell nTPM: 318.0
Samples: 4
Max nTPM: 342.6
Min nTPM: 277.0
RHH5201_R3572
311.3
RHH5229_R3601
277.0
RHH5258_R3630
341.0
RHH5287_R3659
342.6
Non-Vd2 gdTCR nTPM: 453.6
Samples: 4
Max nTPM: 660.4
Min nTPM: 292.2
RHH5235_R3607
292.2
RHH5264_R3636
476.1
RHH5207_R3578
385.7
RHH5299_R3665
660.4
T-reg nTPM: 431.7
Samples: 4
Max nTPM: 600.6
Min nTPM: 281.0
RHH5301_R3667
600.6
RHH5237_R3609
494.7
RHH5266_R3638
281.0
RHH5209_R3580
350.5
Terminal effector memory CD4 T-cell nTPM: 372.7
Samples: 2
Max nTPM: 456.6
Min nTPM: 288.7
RHH5243_R3615
288.7
RHH5272_R3644
456.6
Terminal effector memory CD8 T-cell nTPM: 557.7
Samples: 4
Max nTPM: 861.9
Min nTPM: 391.2
RHH5232_R3604
391.2
RHH5204_R3575
861.9
RHH5261_R3633
438.3
RHH5296_R3662
539.5
Vd2 gdTCR nTPM: 509.8
Samples: 4
Max nTPM: 735.6
Min nTPM: 286.5
RHH5234_R3606
361.3
RHH5206_R3577
735.6
RHH5263_R3635
286.5
RHH5298_R3664
655.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.