HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.8 nTPM
HPA Brain:10.3 nTPM
GTEx:28.8 nTPM
FANTOM5:4.9 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:58.0 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066957
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.0
1898 Male, age 80, left hemisphere 16.2
2529 Female, age 94, left hemisphere 9.5
1911 Female, age 85, right hemisphere 9.1
2148 Female, age 91, left hemisphere 8.6
1855 Male, age 76, left hemisphere 8.3
2621 Female, age 67, right hemisphere 7.9
Dentate gyrus
nTPM: 9.7
2528 Male, age 74, both hemispheres 14.1
2010 Male, age 76, both hemispheres 11.3
1927 Female, age 91, both hemispheres 11.0
2530 Female, age 94, left hemisphere 10.5
2246 Female, age 85, both hemispheres 6.1
2531 Female, age 67, both hemispheres 5.1
Entorhinal gyrus
nTPM: 10.1
2764 Male, age 80, right hemisphere 15.8
1787 Male, age 76, left hemisphere 11.9
2117 Female, age 91, right hemisphere 11.2
1938 Female, age 85, left hemisphere 10.1
2686 Male, age 75, right hemisphere 7.3
2613 Female, age 94, left hemisphere 4.4
Hippocampus, CA1
nTPM: 8.7
2749 Male, age 80, left hemisphere 10.3
1873 Female, age 85, both hemispheres 9.0
2082 Female, age 91, right hemisphere 8.8
2045 Male, age 76, both hemispheres 8.0
2527 Male, age 74, both hemispheres 7.5
Hippocampus, CA2
nTPM: 10.3
1963 Male, age 80, left hemisphere 14.2
1892 Male, age 76, both hemispheres 13.2
2249 Male, age 74, both hemispheres 12.3
2113 Female, age 91, right hemisphere 8.7
1940 Female, age 85, left hemisphere 7.7
2437 Female, age 94, left hemisphere 5.5
Hippocampus, CA3
nTPM: 10.0
2436 Male, age 74, both hemispheres 14.9
1867 Male, age 76, both hemispheres 11.7
1891 Female, age 85, both hemispheres 9.5
2137 Male, age 80, left hemisphere 9.3
2620 Female, age 94, left hemisphere 8.2
2861 Female, age 67, both hemispheres 6.3
Parahippocampal cortex
nTPM: 8.0
1933 Female, age 85, both hemispheres 11.8
1850 Male, age 80, both hemispheres 11.4
2018 Male, age 76, both hemispheres 9.7
2532 Female, age 72, left hemisphere 8.9
1990 Female, age 91, right hemisphere 8.0
2245 Female, age 91, both hemispheres 7.9
2250 Female, age 67, right hemisphere 7.9
2692 Male, age 74, both hemispheres 7.5
2693 Female, age 94, both hemispheres 4.5
2622 Female, age 67, right hemisphere 2.7
Perirhinal gyrus
nTPM: 9.9
1794 Male, age 80, right hemisphere 15.0
1847 Female, age 91, left hemisphere 13.1
1841 Female, age 85, right hemisphere 10.8
2848 Male, age 76, right hemisphere 5.6
2521 Female, age 94, right hemisphere 5.1
Subiculum
nTPM: 9.2
1977 Female, age 85, both hemispheres 13.0
2619 Male, age 74, both hemispheres 10.3
1901 Male, age 80, both hemispheres 9.4
2729 Female, age 91, right hemisphere 8.9
2042 Male, age 76, both hemispheres 8.7
2438 Female, age 94, left hemisphere 5.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.8
Samples: 197

Max nTPM: 55.0
Min nTPM: 5.8
Std nTPM: 8.3
Median nTPM: 28.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 53.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 51.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 47.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 46.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 44.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 42.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 41.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 41.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.9
FF:10153-102I9 76 years, female 5.7
FF:10169-103B7 60 years, female 4.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 30.5
Min nTPM: 19.6
Sample A Female 30.5
Sample B Female 25.1
Sample C Male 19.6
Sample D Male 22.4
Dorsal hippocampus
nTPM: 27.8
Samples: 4

Max nTPM: 35.2
Min nTPM: 22.8
Sample A Female 35.2
Sample B Female 27.1
Sample C Male 25.9
Sample D Male 22.8
Entorhinal cortex
nTPM: 27.5
Samples: 4

Max nTPM: 30.6
Min nTPM: 22.6
Sample A Female 27.7
Sample B Female 30.6
Sample C Male 29.0
Sample D Male 22.6
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 29.7
Min nTPM: 18.8
Sample A Female 27.3
Sample B Female 18.8
Sample C Male 29.7
Sample D Male 28.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.0
Samples: 4

Max nTPM: 63.7
Min nTPM: 38.5
Sample A Male 53.5
Sample B Male 63.7
Sample C Female 56.4
Sample D Female 38.5
Hippocampal formation
nTPM: 58.0
Samples: 4

Max nTPM: 63.8
Min nTPM: 54.9
Sample A Male 63.8
Sample B Male 54.9
Sample C Female 55.0
Sample D Female 58.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
68924437 Antisense, RP_050303_02_D02, Mouse strain C57BL/6J (56 days, male) 2.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org