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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.9
nTPM
Monaco:
167.8
nTPM
Schmiedel:
131.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.9
HPA sample
nTPM
gdT-cell nTPM: 40.9
Samples: 6
Max nTPM: 52.0
Min nTPM: 33.6
P10809_1007
42.1
P10809_1022
45.2
P10809_1041
52.0
P10809_1060
36.4
P10809_1077
36.0
P10809_1098
33.6
MAIT T-cell nTPM: 31.4
Samples: 6
Max nTPM: 45.5
Min nTPM: 18.0
P10809_1006
32.7
P10809_1024
35.6
P10809_1043
45.5
P10809_1062
30.0
P10809_1083
18.0
P10809_1097
26.3
Memory CD4 T-cell nTPM: 27.6
Samples: 6
Max nTPM: 33.9
Min nTPM: 20.8
P10809_1014
22.2
P10809_1026
33.9
P10809_1045
33.9
P10809_1064
27.7
P10809_1086
26.8
P10809_1113
20.8
Memory CD8 T-cell nTPM: 33.0
Samples: 5
Max nTPM: 42.1
Min nTPM: 17.4
P10809_1012
41.1
P10809_1027
17.4
P10809_1046
42.1
P10809_1065
31.3
P10809_1111
33.0
Naive CD4 T-cell nTPM: 14.6
Samples: 6
Max nTPM: 17.9
Min nTPM: 10.8
P10809_1015
14.8
P10809_1030
10.8
P10809_1049
17.9
P10809_1068
17.1
P10809_1085
15.1
P10809_1112
12.0
Naive CD8 T-cell nTPM: 22.7
Samples: 6
Max nTPM: 29.6
Min nTPM: 11.6
P10809_1016
17.1
P10809_1031
29.3
P10809_1050
27.1
P10809_1069
21.4
P10809_1087
29.6
P10809_1110
11.6
T-reg nTPM: 27.5
Samples: 6
Max nTPM: 33.2
Min nTPM: 15.5
P10809_1018
32.0
P10809_1037
30.8
P10809_1056
33.2
P10809_1075
30.5
P10809_1094
23.0
P10809_1106
15.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.0
Samples: 4
Max nTPM: 169.9
Min nTPM: 80.4
RHH5202_R3573
112.9
RHH5230_R3602
169.9
RHH5259_R3631
80.4
RHH5288_R3660
108.8
Effector memory CD8 T-cell nTPM: 142.7
Samples: 4
Max nTPM: 150.4
Min nTPM: 128.8
RHH5203_R3574
150.4
RHH5231_R3603
143.9
RHH5260_R3632
128.8
RHH5289_R3661
147.7
MAIT T-cell nTPM: 158.8
Samples: 4
Max nTPM: 166.7
Min nTPM: 153.3
RHH5233_R3605
157.6
RHH5205_R3576
166.7
RHH5262_R3634
157.4
RHH5297_R3663
153.3
Memory CD4 T-cell TFH nTPM: 101.5
Samples: 4
Max nTPM: 130.9
Min nTPM: 67.2
RHH5300_R3666
119.1
RHH5236_R3608
67.2
RHH5265_R3637
88.7
RHH5208_R3579
130.9
Memory CD4 T-cell Th1 nTPM: 100.9
Samples: 4
Max nTPM: 126.3
Min nTPM: 75.0
RHH5210_R3581
75.0
RHH5302_R3668
126.3
RHH5238_R3610
99.6
RHH5267_R3639
102.5
Memory CD4 T-cell Th1/Th17 nTPM: 112.9
Samples: 4
Max nTPM: 132.5
Min nTPM: 97.3
RHH5303_R3669
132.5
RHH5211_R3582
97.3
RHH5239_R3611
110.9
RHH5268_R3640
110.7
Memory CD4 T-cell Th17 nTPM: 106.6
Samples: 4
Max nTPM: 125.5
Min nTPM: 96.5
RHH5304_R3670
125.5
RHH5212_R3583
103.7
RHH5240_R3612
96.5
RHH5269_R3641
100.5
Memory CD4 T-cell Th2 nTPM: 102.3
Samples: 4
Max nTPM: 122.0
Min nTPM: 83.9
RHH5305_R3671
122.0
RHH5213_R3584
100.2
RHH5241_R3613
102.9
RHH5270_R3642
83.9
Naive CD4 T-cell nTPM: 56.4
Samples: 4
Max nTPM: 76.1
Min nTPM: 39.3
RHH5306_R3672
56.8
RHH5214_R3585
39.3
RHH5242_R3614
76.1
RHH5271_R3643
53.4
Naive CD8 T-cell nTPM: 58.6
Samples: 4
Max nTPM: 63.6
Min nTPM: 53.4
RHH5201_R3572
63.6
RHH5229_R3601
54.3
RHH5258_R3630
53.4
RHH5287_R3659
63.0
Non-Vd2 gdTCR nTPM: 134.8
Samples: 4
Max nTPM: 153.2
Min nTPM: 120.6
RHH5235_R3607
153.2
RHH5264_R3636
120.6
RHH5207_R3578
127.1
RHH5299_R3665
138.3
T-reg nTPM: 66.0
Samples: 4
Max nTPM: 101.2
Min nTPM: 45.5
RHH5301_R3667
101.2
RHH5237_R3609
45.5
RHH5266_R3638
68.7
RHH5209_R3580
48.5
Terminal effector memory CD4 T-cell nTPM: 136.9
Samples: 2
Max nTPM: 160.1
Min nTPM: 113.7
RHH5243_R3615
160.1
RHH5272_R3644
113.7
Terminal effector memory CD8 T-cell nTPM: 143.7
Samples: 4
Max nTPM: 184.1
Min nTPM: 106.4
RHH5232_R3604
184.1
RHH5204_R3575
106.4
RHH5261_R3633
113.1
RHH5296_R3662
171.3
Vd2 gdTCR nTPM: 167.8
Samples: 4
Max nTPM: 194.8
Min nTPM: 151.1
RHH5234_R3606
194.8
RHH5206_R3577
169.9
RHH5263_R3635
151.1
RHH5298_R3664
155.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
