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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.8
nTPM
Monaco:
114.2
nTPM
Schmiedel:
18.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.8
HPA sample
nTPM
gdT-cell nTPM: 11.4
Samples: 6
Max nTPM: 16.2
Min nTPM: 5.0
P10809_1007
8.3
P10809_1022
16.2
P10809_1041
9.3
P10809_1060
14.0
P10809_1077
15.7
P10809_1098
5.0
MAIT T-cell nTPM: 13.1
Samples: 6
Max nTPM: 17.5
Min nTPM: 10.6
P10809_1006
10.6
P10809_1024
13.3
P10809_1043
11.1
P10809_1062
13.3
P10809_1083
17.5
P10809_1097
12.8
Memory CD4 T-cell nTPM: 11.5
Samples: 6
Max nTPM: 14.4
Min nTPM: 9.1
P10809_1014
9.1
P10809_1026
11.3
P10809_1045
11.7
P10809_1064
12.3
P10809_1086
14.4
P10809_1113
10.4
Memory CD8 T-cell nTPM: 10.3
Samples: 5
Max nTPM: 15.7
Min nTPM: 4.8
P10809_1012
4.8
P10809_1027
15.7
P10809_1046
8.0
P10809_1065
13.8
P10809_1111
9.4
Naive CD4 T-cell nTPM: 18.9
Samples: 6
Max nTPM: 25.1
Min nTPM: 12.4
P10809_1015
12.4
P10809_1030
22.2
P10809_1049
24.4
P10809_1068
25.1
P10809_1085
14.8
P10809_1112
14.2
Naive CD8 T-cell nTPM: 12.1
Samples: 6
Max nTPM: 15.7
Min nTPM: 7.9
P10809_1016
13.1
P10809_1031
15.7
P10809_1050
12.4
P10809_1069
10.8
P10809_1087
12.8
P10809_1110
7.9
T-reg nTPM: 9.7
Samples: 6
Max nTPM: 16.8
Min nTPM: 4.0
P10809_1018
5.4
P10809_1037
4.0
P10809_1056
6.0
P10809_1075
15.7
P10809_1094
10.3
P10809_1106
16.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 90.7
Samples: 4
Max nTPM: 109.7
Min nTPM: 80.7
RHH5202_R3573
109.7
RHH5230_R3602
80.7
RHH5259_R3631
80.7
RHH5288_R3660
91.8
Effector memory CD8 T-cell nTPM: 63.9
Samples: 4
Max nTPM: 101.6
Min nTPM: 39.6
RHH5203_R3574
70.1
RHH5231_R3603
44.1
RHH5260_R3632
39.6
RHH5289_R3661
101.6
MAIT T-cell nTPM: 111.5
Samples: 4
Max nTPM: 125.4
Min nTPM: 94.5
RHH5233_R3605
118.7
RHH5205_R3576
125.4
RHH5262_R3634
107.5
RHH5297_R3663
94.5
Memory CD4 T-cell TFH nTPM: 87.4
Samples: 4
Max nTPM: 122.3
Min nTPM: 64.4
RHH5300_R3666
64.4
RHH5236_R3608
88.5
RHH5265_R3637
122.3
RHH5208_R3579
74.5
Memory CD4 T-cell Th1 nTPM: 96.0
Samples: 4
Max nTPM: 127.3
Min nTPM: 80.3
RHH5210_R3581
127.3
RHH5302_R3668
81.6
RHH5238_R3610
94.9
RHH5267_R3639
80.3
Memory CD4 T-cell Th1/Th17 nTPM: 83.4
Samples: 4
Max nTPM: 106.3
Min nTPM: 67.9
RHH5303_R3669
68.8
RHH5211_R3582
67.9
RHH5239_R3611
106.3
RHH5268_R3640
90.7
Memory CD4 T-cell Th17 nTPM: 74.8
Samples: 4
Max nTPM: 121.0
Min nTPM: 54.4
RHH5304_R3670
62.7
RHH5212_R3583
60.9
RHH5240_R3612
54.4
RHH5269_R3641
121.0
Memory CD4 T-cell Th2 nTPM: 85.6
Samples: 4
Max nTPM: 118.9
Min nTPM: 63.8
RHH5305_R3671
63.8
RHH5213_R3584
76.5
RHH5241_R3613
83.1
RHH5270_R3642
118.9
Naive CD4 T-cell nTPM: 114.2
Samples: 4
Max nTPM: 161.5
Min nTPM: 79.5
RHH5306_R3672
79.5
RHH5214_R3585
108.6
RHH5242_R3614
161.5
RHH5271_R3643
107.2
Naive CD8 T-cell nTPM: 101.8
Samples: 4
Max nTPM: 120.3
Min nTPM: 77.0
RHH5201_R3572
120.3
RHH5229_R3601
105.7
RHH5258_R3630
77.0
RHH5287_R3659
104.0
Non-Vd2 gdTCR nTPM: 93.7
Samples: 4
Max nTPM: 134.4
Min nTPM: 72.9
RHH5235_R3607
80.8
RHH5264_R3636
72.9
RHH5207_R3578
134.4
RHH5299_R3665
86.5
T-reg nTPM: 91.0
Samples: 4
Max nTPM: 104.9
Min nTPM: 72.5
RHH5301_R3667
72.5
RHH5237_R3609
93.0
RHH5266_R3638
104.9
RHH5209_R3580
93.5
Terminal effector memory CD4 T-cell nTPM: 74.7
Samples: 2
Max nTPM: 83.1
Min nTPM: 66.2
RHH5243_R3615
66.2
RHH5272_R3644
83.1
Terminal effector memory CD8 T-cell nTPM: 82.5
Samples: 4
Max nTPM: 105.8
Min nTPM: 62.1
RHH5232_R3604
79.9
RHH5204_R3575
105.8
RHH5261_R3633
62.1
RHH5296_R3662
82.3
Vd2 gdTCR nTPM: 81.5
Samples: 4
Max nTPM: 108.1
Min nTPM: 42.4
RHH5234_R3606
108.1
RHH5206_R3577
42.4
RHH5263_R3635
71.3
RHH5298_R3664
104.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
