HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:240.1 nTPM
HPA Brain:216.8 nTPM
GTEx:240.1 nTPM
FANTOM5:233.7 Scaled Tags Per Million
Pig:219.5 nTPM
Mouse:414.1 nTPM
Allen mouse:26.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015996
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 216.8
Sample id Sample description nTPM
Hippocampus
nTPM: 210.7
1898 Male, age 80, left hemisphere 258.8
1855 Male, age 76, left hemisphere 232.6
2529 Female, age 94, left hemisphere 207.0
2148 Female, age 91, left hemisphere 203.3
2621 Female, age 67, right hemisphere 181.7
1911 Female, age 85, right hemisphere 180.7
Dentate gyrus
nTPM: 189.2
2528 Male, age 74, both hemispheres 225.5
2010 Male, age 76, both hemispheres 217.2
2246 Female, age 85, both hemispheres 199.9
2530 Female, age 94, left hemisphere 190.1
1927 Female, age 91, both hemispheres 178.5
2531 Female, age 67, both hemispheres 124.2
Entorhinal gyrus
nTPM: 181.5
2117 Female, age 91, right hemisphere 254.8
1938 Female, age 85, left hemisphere 196.4
1787 Male, age 76, left hemisphere 185.2
2764 Male, age 80, right hemisphere 176.9
2686 Male, age 75, right hemisphere 139.1
2613 Female, age 94, left hemisphere 136.5
Hippocampus, CA1
nTPM: 216.8
2749 Male, age 80, left hemisphere 256.1
2527 Male, age 74, both hemispheres 221.1
1873 Female, age 85, both hemispheres 216.5
2045 Male, age 76, both hemispheres 198.8
2082 Female, age 91, right hemisphere 191.4
Hippocampus, CA2
nTPM: 201.2
2249 Male, age 74, both hemispheres 225.9
1963 Male, age 80, left hemisphere 221.6
1892 Male, age 76, both hemispheres 204.7
1940 Female, age 85, left hemisphere 196.9
2113 Female, age 91, right hemisphere 187.1
2437 Female, age 94, left hemisphere 171.2
Hippocampus, CA3
nTPM: 187.0
2436 Male, age 74, both hemispheres 227.6
2137 Male, age 80, left hemisphere 201.0
1891 Female, age 85, both hemispheres 199.0
1867 Male, age 76, both hemispheres 192.7
2620 Female, age 94, left hemisphere 163.4
2861 Female, age 67, both hemispheres 138.3
Parahippocampal cortex
nTPM: 185.3
1850 Male, age 80, both hemispheres 236.9
2250 Female, age 67, right hemisphere 207.6
1933 Female, age 85, both hemispheres 192.9
2692 Male, age 74, both hemispheres 189.9
2018 Male, age 76, both hemispheres 189.4
1990 Female, age 91, right hemisphere 186.8
2245 Female, age 91, both hemispheres 175.7
2693 Female, age 94, both hemispheres 166.5
2622 Female, age 67, right hemisphere 155.9
2532 Female, age 72, left hemisphere 151.3
Perirhinal gyrus
nTPM: 215.7
1794 Male, age 80, right hemisphere 255.5
1847 Female, age 91, left hemisphere 240.4
1841 Female, age 85, right hemisphere 220.7
2521 Female, age 94, right hemisphere 189.4
2848 Male, age 76, right hemisphere 172.6
Subiculum
nTPM: 201.1
2729 Female, age 91, right hemisphere 238.2
1901 Male, age 80, both hemispheres 198.9
1977 Female, age 85, both hemispheres 196.4
2619 Male, age 74, both hemispheres 194.5
2438 Female, age 94, left hemisphere 193.5
2042 Male, age 76, both hemispheres 185.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 240.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 240.1
Samples: 197

Max nTPM: 410.3
Min nTPM: 118.7
Std nTPM: 49.1
Median nTPM: 237.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 410.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 359.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 355.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 348.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 345.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 343.3
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 342.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 340.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 334.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 331.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 325.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 233.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 233.7
FF:10153-102I9 76 years, female 237.0
FF:10169-103B7 60 years, female 230.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 219.5
Pig sample Sample description nTPM
Subiculum
nTPM: 192.2
Samples: 4

Max nTPM: 225.0
Min nTPM: 172.9
Sample A Female 225.0
Sample B Female 172.9
Sample C Male 183.3
Sample D Male 187.4
Dorsal hippocampus
nTPM: 219.5
Samples: 4

Max nTPM: 273.0
Min nTPM: 170.6
Sample A Female 273.0
Sample B Female 221.8
Sample C Male 212.4
Sample D Male 170.6
Entorhinal cortex
nTPM: 203.4
Samples: 4

Max nTPM: 231.6
Min nTPM: 160.2
Sample A Female 218.3
Sample B Female 231.6
Sample C Male 203.5
Sample D Male 160.2
Ventral hippocampus
nTPM: 206.8
Samples: 4

Max nTPM: 243.6
Min nTPM: 160.8
Sample A Female 243.6
Sample B Female 160.8
Sample C Male 229.9
Sample D Male 193.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 414.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 380.8
Samples: 4

Max nTPM: 395.1
Min nTPM: 371.3
Sample A Male 371.3
Sample B Male 384.1
Sample C Female 395.1
Sample D Female 372.5
Hippocampal formation
nTPM: 414.1
Samples: 4

Max nTPM: 434.1
Min nTPM: 386.7
Sample A Male 434.1
Sample B Male 386.7
Sample C Female 421.9
Sample D Female 413.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 26.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.0
71489783 Antisense, RP_050512_04_E11, Mouse strain C57BL/6J (56 days, male) 26.0

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