HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:32.7 nTPM
HPA Brain:59.1 nTPM
GTEx:32.7 nTPM
FANTOM5:34.5 Scaled Tags Per Million
Pig:41.2 nTPM
Mouse:63.9 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039932Antibody HPA040065
Glial cells Not detectedNot detected
Neuronal cells MediumMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.1
Sample id Sample description nTPM
Hippocampus
nTPM: 43.9
2529 Female, age 94, left hemisphere 59.4
1855 Male, age 76, left hemisphere 49.8
1911 Female, age 85, right hemisphere 41.4
1898 Male, age 80, left hemisphere 39.1
2148 Female, age 91, left hemisphere 38.5
2621 Female, age 67, right hemisphere 35.4
Dentate gyrus
nTPM: 47.6
2010 Male, age 76, both hemispheres 71.3
2530 Female, age 94, left hemisphere 47.1
2531 Female, age 67, both hemispheres 43.6
1927 Female, age 91, both hemispheres 42.8
2246 Female, age 85, both hemispheres 40.7
2528 Male, age 74, both hemispheres 39.9
Entorhinal gyrus
nTPM: 42.9
1787 Male, age 76, left hemisphere 55.3
2686 Male, age 75, right hemisphere 46.2
1938 Female, age 85, left hemisphere 40.7
2764 Male, age 80, right hemisphere 39.9
2613 Female, age 94, left hemisphere 38.3
2117 Female, age 91, right hemisphere 37.2
Hippocampus, CA1
nTPM: 59.1
2045 Male, age 76, both hemispheres 112.7
2749 Male, age 80, left hemisphere 51.1
2082 Female, age 91, right hemisphere 48.6
2527 Male, age 74, both hemispheres 41.9
1873 Female, age 85, both hemispheres 41.3
Hippocampus, CA2
nTPM: 54.8
1892 Male, age 76, both hemispheres 100.9
2437 Female, age 94, left hemisphere 50.3
2249 Male, age 74, both hemispheres 47.7
2113 Female, age 91, right hemisphere 46.8
1963 Male, age 80, left hemisphere 42.4
1940 Female, age 85, left hemisphere 40.8
Hippocampus, CA3
nTPM: 49.5
1867 Male, age 76, both hemispheres 99.8
2137 Male, age 80, left hemisphere 42.2
1891 Female, age 85, both hemispheres 40.8
2620 Female, age 94, left hemisphere 39.7
2436 Male, age 74, both hemispheres 38.7
2861 Female, age 67, both hemispheres 36.0
Parahippocampal cortex
nTPM: 43.8
2018 Male, age 76, both hemispheres 63.7
2250 Female, age 67, right hemisphere 56.9
1990 Female, age 91, right hemisphere 43.8
2245 Female, age 91, both hemispheres 42.2
2693 Female, age 94, both hemispheres 41.5
2622 Female, age 67, right hemisphere 39.5
2692 Male, age 74, both hemispheres 38.4
1850 Male, age 80, both hemispheres 38.3
1933 Female, age 85, both hemispheres 37.5
2532 Female, age 72, left hemisphere 36.5
Perirhinal gyrus
nTPM: 52.1
2848 Male, age 76, right hemisphere 93.8
2521 Female, age 94, right hemisphere 44.1
1794 Male, age 80, right hemisphere 42.8
1841 Female, age 85, right hemisphere 42.3
1847 Female, age 91, left hemisphere 37.5
Subiculum
nTPM: 49.5
2042 Male, age 76, both hemispheres 93.7
2438 Female, age 94, left hemisphere 47.1
1901 Male, age 80, both hemispheres 42.8
1977 Female, age 85, both hemispheres 39.8
2729 Female, age 91, right hemisphere 38.9
2619 Male, age 74, both hemispheres 34.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.7
Samples: 197

Max nTPM: 52.5
Min nTPM: 16.5
Std nTPM: 6.1
Median nTPM: 32.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 51.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 46.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.4
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 45.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 44.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 44.1
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 43.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 42.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.5
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 28.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.2
Pig sample Sample description nTPM
Subiculum
nTPM: 32.2
Samples: 4

Max nTPM: 38.8
Min nTPM: 28.8
Sample A Female 38.8
Sample B Female 30.7
Sample C Male 28.8
Sample D Male 30.5
Dorsal hippocampus
nTPM: 41.2
Samples: 4

Max nTPM: 51.8
Min nTPM: 32.8
Sample A Female 51.8
Sample B Female 40.0
Sample C Male 40.1
Sample D Male 32.8
Entorhinal cortex
nTPM: 37.7
Samples: 4

Max nTPM: 48.2
Min nTPM: 26.5
Sample A Female 36.9
Sample B Female 48.2
Sample C Male 39.2
Sample D Male 26.5
Ventral hippocampus
nTPM: 35.4
Samples: 4

Max nTPM: 39.0
Min nTPM: 28.0
Sample A Female 37.6
Sample B Female 28.0
Sample C Male 39.0
Sample D Male 37.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 57.1
Samples: 4

Max nTPM: 62.9
Min nTPM: 47.7
Sample A Male 57.2
Sample B Male 62.9
Sample C Female 60.4
Sample D Female 47.7
Hippocampal formation
nTPM: 64.0
Samples: 4

Max nTPM: 76.8
Min nTPM: 56.7
Sample A Male 76.8
Sample B Male 61.7
Sample C Female 60.6
Sample D Female 56.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
70445455 Antisense, RP_050614_03_H02, Mouse strain C57BL/6J (56 days, male) 4.7

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