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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
105.6
nTPM
Monaco:
173.7
nTPM
Schmiedel:
122.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
105.6
HPA sample
nTPM
gdT-cell nTPM: 94.3
Samples: 6
Max nTPM: 107.7
Min nTPM: 80.8
P10809_1007
82.8
P10809_1022
105.0
P10809_1041
93.0
P10809_1060
80.8
P10809_1077
96.4
P10809_1098
107.7
MAIT T-cell nTPM: 76.2
Samples: 6
Max nTPM: 91.2
Min nTPM: 63.7
P10809_1006
63.7
P10809_1024
77.9
P10809_1043
80.8
P10809_1062
73.7
P10809_1083
91.2
P10809_1097
70.0
Memory CD4 T-cell nTPM: 85.5
Samples: 6
Max nTPM: 99.4
Min nTPM: 73.4
P10809_1014
80.3
P10809_1026
73.4
P10809_1045
84.4
P10809_1064
99.4
P10809_1086
92.5
P10809_1113
82.8
Memory CD8 T-cell nTPM: 95.8
Samples: 5
Max nTPM: 101.7
Min nTPM: 88.3
P10809_1012
88.3
P10809_1027
88.8
P10809_1046
101.7
P10809_1065
101.6
P10809_1111
98.8
Naive CD4 T-cell nTPM: 69.6
Samples: 6
Max nTPM: 90.5
Min nTPM: 53.3
P10809_1015
53.3
P10809_1030
58.2
P10809_1049
62.5
P10809_1068
74.0
P10809_1085
90.5
P10809_1112
79.2
Naive CD8 T-cell nTPM: 75.9
Samples: 6
Max nTPM: 102.4
Min nTPM: 57.7
P10809_1016
57.7
P10809_1031
58.9
P10809_1050
69.6
P10809_1069
102.4
P10809_1087
98.4
P10809_1110
68.6
T-reg nTPM: 105.6
Samples: 6
Max nTPM: 135.9
Min nTPM: 65.8
P10809_1018
104.4
P10809_1037
65.8
P10809_1056
129.3
P10809_1075
99.1
P10809_1094
135.9
P10809_1106
99.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
173.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 128.0
Samples: 4
Max nTPM: 143.9
Min nTPM: 111.2
RHH5202_R3573
130.2
RHH5230_R3602
143.9
RHH5259_R3631
111.2
RHH5288_R3660
126.6
Effector memory CD8 T-cell nTPM: 166.9
Samples: 4
Max nTPM: 192.6
Min nTPM: 126.3
RHH5203_R3574
166.1
RHH5231_R3603
182.4
RHH5260_R3632
192.6
RHH5289_R3661
126.3
MAIT T-cell nTPM: 120.1
Samples: 4
Max nTPM: 148.5
Min nTPM: 97.0
RHH5233_R3605
129.1
RHH5205_R3576
148.5
RHH5262_R3634
105.8
RHH5297_R3663
97.0
Memory CD4 T-cell TFH nTPM: 147.7
Samples: 4
Max nTPM: 163.4
Min nTPM: 120.2
RHH5300_R3666
120.2
RHH5236_R3608
154.5
RHH5265_R3637
163.4
RHH5208_R3579
152.6
Memory CD4 T-cell Th1 nTPM: 137.4
Samples: 4
Max nTPM: 153.5
Min nTPM: 119.6
RHH5210_R3581
153.5
RHH5302_R3668
119.6
RHH5238_R3610
126.3
RHH5267_R3639
150.3
Memory CD4 T-cell Th1/Th17 nTPM: 134.7
Samples: 4
Max nTPM: 143.6
Min nTPM: 121.6
RHH5303_R3669
134.0
RHH5211_R3582
143.6
RHH5239_R3611
121.6
RHH5268_R3640
139.7
Memory CD4 T-cell Th17 nTPM: 147.1
Samples: 4
Max nTPM: 160.4
Min nTPM: 128.3
RHH5304_R3670
128.3
RHH5212_R3583
153.2
RHH5240_R3612
160.4
RHH5269_R3641
146.3
Memory CD4 T-cell Th2 nTPM: 146.3
Samples: 4
Max nTPM: 165.5
Min nTPM: 120.0
RHH5305_R3671
120.0
RHH5213_R3584
165.5
RHH5241_R3613
156.3
RHH5270_R3642
143.4
Naive CD4 T-cell nTPM: 110.2
Samples: 4
Max nTPM: 129.0
Min nTPM: 97.0
RHH5306_R3672
129.0
RHH5214_R3585
102.5
RHH5242_R3614
97.0
RHH5271_R3643
112.4
Naive CD8 T-cell nTPM: 105.0
Samples: 4
Max nTPM: 122.9
Min nTPM: 84.8
RHH5201_R3572
122.9
RHH5229_R3601
92.3
RHH5258_R3630
119.8
RHH5287_R3659
84.8
Non-Vd2 gdTCR nTPM: 160.5
Samples: 4
Max nTPM: 171.6
Min nTPM: 134.5
RHH5235_R3607
171.6
RHH5264_R3636
169.5
RHH5207_R3578
166.5
RHH5299_R3665
134.5
T-reg nTPM: 129.7
Samples: 4
Max nTPM: 140.4
Min nTPM: 118.4
RHH5301_R3667
118.4
RHH5237_R3609
133.4
RHH5266_R3638
126.7
RHH5209_R3580
140.4
Terminal effector memory CD4 T-cell nTPM: 173.7
Samples: 2
Max nTPM: 188.5
Min nTPM: 158.9
RHH5243_R3615
188.5
RHH5272_R3644
158.9
Terminal effector memory CD8 T-cell nTPM: 148.1
Samples: 4
Max nTPM: 162.2
Min nTPM: 128.9
RHH5232_R3604
162.2
RHH5204_R3575
128.9
RHH5261_R3633
155.9
RHH5296_R3662
145.2
Vd2 gdTCR nTPM: 138.6
Samples: 4
Max nTPM: 162.8
Min nTPM: 111.8
RHH5234_R3606
133.3
RHH5206_R3577
162.8
RHH5263_R3635
146.4
RHH5298_R3664
111.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
