We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.0
nTPM
Monaco:
58.7
nTPM
Schmiedel:
314.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.0
HPA sample
nTPM
gdT-cell nTPM: 1.2
Samples: 6
Max nTPM: 2.2
Min nTPM: 0.0
P10809_1007
1.5
P10809_1022
0.7
P10809_1041
0.0
P10809_1060
0.7
P10809_1077
2.2
P10809_1098
2.2
MAIT T-cell nTPM: 5.4
Samples: 6
Max nTPM: 8.3
Min nTPM: 3.9
P10809_1006
8.3
P10809_1024
5.2
P10809_1043
4.0
P10809_1062
6.5
P10809_1083
4.4
P10809_1097
3.9
Memory CD4 T-cell nTPM: 18.4
Samples: 6
Max nTPM: 29.2
Min nTPM: 10.6
P10809_1014
29.2
P10809_1026
21.0
P10809_1045
13.3
P10809_1064
14.8
P10809_1086
10.6
P10809_1113
21.3
Memory CD8 T-cell nTPM: 7.3
Samples: 5
Max nTPM: 17.6
Min nTPM: 0.5
P10809_1012
17.6
P10809_1027
4.8
P10809_1046
4.3
P10809_1065
0.5
P10809_1111
9.5
Naive CD4 T-cell nTPM: 18.4
Samples: 6
Max nTPM: 25.8
Min nTPM: 13.3
P10809_1015
20.4
P10809_1030
15.0
P10809_1049
17.1
P10809_1068
25.8
P10809_1085
13.3
P10809_1112
18.5
Naive CD8 T-cell nTPM: 8.6
Samples: 6
Max nTPM: 18.8
Min nTPM: 0.9
P10809_1016
18.8
P10809_1031
9.0
P10809_1050
6.0
P10809_1069
5.1
P10809_1087
0.9
P10809_1110
11.8
T-reg nTPM: 51.0
Samples: 6
Max nTPM: 80.2
Min nTPM: 24.5
P10809_1018
71.1
P10809_1037
24.5
P10809_1056
46.3
P10809_1075
48.2
P10809_1094
80.2
P10809_1106
35.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 45.6
Min nTPM: 29.8
RHH5202_R3573
45.6
RHH5230_R3602
42.7
RHH5259_R3631
29.8
RHH5288_R3660
39.4
Effector memory CD8 T-cell nTPM: 16.6
Samples: 4
Max nTPM: 22.1
Min nTPM: 12.5
RHH5203_R3574
22.1
RHH5231_R3603
15.3
RHH5260_R3632
12.5
RHH5289_R3661
16.5
MAIT T-cell nTPM: 8.6
Samples: 4
Max nTPM: 12.9
Min nTPM: 6.0
RHH5233_R3605
6.3
RHH5205_R3576
12.9
RHH5262_R3634
9.2
RHH5297_R3663
6.0
Memory CD4 T-cell TFH nTPM: 40.7
Samples: 4
Max nTPM: 64.0
Min nTPM: 29.0
RHH5300_R3666
29.0
RHH5236_R3608
34.8
RHH5265_R3637
34.8
RHH5208_R3579
64.0
Memory CD4 T-cell Th1 nTPM: 35.8
Samples: 4
Max nTPM: 51.7
Min nTPM: 26.6
RHH5210_R3581
35.5
RHH5302_R3668
29.3
RHH5238_R3610
26.6
RHH5267_R3639
51.7
Memory CD4 T-cell Th1/Th17 nTPM: 25.9
Samples: 4
Max nTPM: 32.4
Min nTPM: 10.6
RHH5303_R3669
32.4
RHH5211_R3582
31.0
RHH5239_R3611
10.6
RHH5268_R3640
29.6
Memory CD4 T-cell Th17 nTPM: 33.0
Samples: 4
Max nTPM: 41.4
Min nTPM: 23.9
RHH5304_R3670
23.9
RHH5212_R3583
35.1
RHH5240_R3612
41.4
RHH5269_R3641
31.5
Memory CD4 T-cell Th2 nTPM: 43.4
Samples: 4
Max nTPM: 65.0
Min nTPM: 26.1
RHH5305_R3671
39.6
RHH5213_R3584
65.0
RHH5241_R3613
26.1
RHH5270_R3642
42.8
Naive CD4 T-cell nTPM: 30.7
Samples: 4
Max nTPM: 39.9
Min nTPM: 20.4
RHH5306_R3672
38.6
RHH5214_R3585
24.0
RHH5242_R3614
39.9
RHH5271_R3643
20.4
Naive CD8 T-cell nTPM: 20.6
Samples: 4
Max nTPM: 29.5
Min nTPM: 8.0
RHH5201_R3572
19.1
RHH5229_R3601
8.0
RHH5258_R3630
29.5
RHH5287_R3659
25.8
Non-Vd2 gdTCR nTPM: 3.1
Samples: 4
Max nTPM: 3.7
Min nTPM: 2.6
RHH5235_R3607
2.6
RHH5264_R3636
3.6
RHH5207_R3578
3.7
RHH5299_R3665
2.6
T-reg nTPM: 58.7
Samples: 4
Max nTPM: 68.4
Min nTPM: 44.1
RHH5301_R3667
64.2
RHH5237_R3609
58.1
RHH5266_R3638
68.4
RHH5209_R3580
44.1
Terminal effector memory CD4 T-cell nTPM: 5.0
Samples: 2
Max nTPM: 9.9
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
9.9
Terminal effector memory CD8 T-cell nTPM: 1.5
Samples: 4
Max nTPM: 4.5
Min nTPM: 0.1
RHH5232_R3604
0.5
RHH5204_R3575
0.1
RHH5261_R3633
0.9
RHH5296_R3662
4.5
Vd2 gdTCR nTPM: 6.3
Samples: 4
Max nTPM: 15.4
Min nTPM: 2.2
RHH5234_R3606
2.2
RHH5206_R3577
4.9
RHH5263_R3635
15.4
RHH5298_R3664
2.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
