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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.8
nTPM
Monaco:
239.3
nTPM
Schmiedel:
153.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.8
HPA sample
nTPM
gdT-cell nTPM: 21.8
Samples: 6
Max nTPM: 31.1
Min nTPM: 14.9
P10809_1007
31.1
P10809_1022
16.0
P10809_1041
25.1
P10809_1060
14.9
P10809_1077
18.8
P10809_1098
25.0
MAIT T-cell nTPM: 19.3
Samples: 6
Max nTPM: 25.8
Min nTPM: 14.8
P10809_1006
23.9
P10809_1024
16.4
P10809_1043
16.7
P10809_1062
14.8
P10809_1083
25.8
P10809_1097
18.1
Memory CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 15.6
Min nTPM: 8.8
P10809_1014
14.8
P10809_1026
8.8
P10809_1045
12.4
P10809_1064
15.6
P10809_1086
15.0
P10809_1113
14.3
Memory CD8 T-cell nTPM: 18.9
Samples: 5
Max nTPM: 24.3
Min nTPM: 17.3
P10809_1012
17.5
P10809_1027
24.3
P10809_1046
17.3
P10809_1065
17.4
P10809_1111
18.0
Naive CD4 T-cell nTPM: 7.9
Samples: 6
Max nTPM: 11.0
Min nTPM: 5.1
P10809_1015
11.0
P10809_1030
5.1
P10809_1049
5.7
P10809_1068
7.5
P10809_1085
10.8
P10809_1112
7.5
Naive CD8 T-cell nTPM: 14.0
Samples: 6
Max nTPM: 25.7
Min nTPM: 8.6
P10809_1016
8.6
P10809_1031
9.3
P10809_1050
15.4
P10809_1069
14.7
P10809_1087
25.7
P10809_1110
10.2
T-reg nTPM: 16.2
Samples: 6
Max nTPM: 21.1
Min nTPM: 10.2
P10809_1018
21.1
P10809_1037
15.8
P10809_1056
10.2
P10809_1075
14.0
P10809_1094
15.3
P10809_1106
20.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
239.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 127.9
Samples: 4
Max nTPM: 143.2
Min nTPM: 121.9
RHH5202_R3573
143.2
RHH5230_R3602
122.6
RHH5259_R3631
121.9
RHH5288_R3660
124.0
Effector memory CD8 T-cell nTPM: 212.2
Samples: 4
Max nTPM: 300.7
Min nTPM: 143.7
RHH5203_R3574
218.3
RHH5231_R3603
186.1
RHH5260_R3632
143.7
RHH5289_R3661
300.7
MAIT T-cell nTPM: 160.5
Samples: 4
Max nTPM: 189.6
Min nTPM: 132.3
RHH5233_R3605
183.2
RHH5205_R3576
189.6
RHH5262_R3634
137.0
RHH5297_R3663
132.3
Memory CD4 T-cell TFH nTPM: 103.9
Samples: 4
Max nTPM: 119.8
Min nTPM: 85.9
RHH5300_R3666
92.0
RHH5236_R3608
117.8
RHH5265_R3637
85.9
RHH5208_R3579
119.8
Memory CD4 T-cell Th1 nTPM: 117.4
Samples: 4
Max nTPM: 144.3
Min nTPM: 106.0
RHH5210_R3581
107.1
RHH5302_R3668
112.1
RHH5238_R3610
144.3
RHH5267_R3639
106.0
Memory CD4 T-cell Th1/Th17 nTPM: 135.5
Samples: 4
Max nTPM: 150.4
Min nTPM: 109.8
RHH5303_R3669
109.8
RHH5211_R3582
150.4
RHH5239_R3611
147.9
RHH5268_R3640
134.0
Memory CD4 T-cell Th17 nTPM: 124.6
Samples: 4
Max nTPM: 144.5
Min nTPM: 101.6
RHH5304_R3670
125.5
RHH5212_R3583
101.6
RHH5240_R3612
144.5
RHH5269_R3641
126.9
Memory CD4 T-cell Th2 nTPM: 135.5
Samples: 4
Max nTPM: 156.8
Min nTPM: 118.1
RHH5305_R3671
123.6
RHH5213_R3584
143.4
RHH5241_R3613
156.8
RHH5270_R3642
118.1
Naive CD4 T-cell nTPM: 82.2
Samples: 4
Max nTPM: 110.8
Min nTPM: 60.8
RHH5306_R3672
60.8
RHH5214_R3585
73.9
RHH5242_R3614
110.8
RHH5271_R3643
83.4
Naive CD8 T-cell nTPM: 69.8
Samples: 4
Max nTPM: 91.7
Min nTPM: 56.8
RHH5201_R3572
91.7
RHH5229_R3601
66.3
RHH5258_R3630
56.8
RHH5287_R3659
64.2
Non-Vd2 gdTCR nTPM: 220.6
Samples: 4
Max nTPM: 298.4
Min nTPM: 171.3
RHH5235_R3607
194.0
RHH5264_R3636
218.7
RHH5207_R3578
298.4
RHH5299_R3665
171.3
T-reg nTPM: 123.7
Samples: 4
Max nTPM: 180.1
Min nTPM: 103.1
RHH5301_R3667
104.3
RHH5237_R3609
180.1
RHH5266_R3638
107.3
RHH5209_R3580
103.1
Terminal effector memory CD4 T-cell nTPM: 236.0
Samples: 2
Max nTPM: 282.7
Min nTPM: 189.3
RHH5243_R3615
282.7
RHH5272_R3644
189.3
Terminal effector memory CD8 T-cell nTPM: 239.3
Samples: 4
Max nTPM: 247.0
Min nTPM: 232.1
RHH5232_R3604
232.1
RHH5204_R3575
247.0
RHH5261_R3633
242.5
RHH5296_R3662
235.4
Vd2 gdTCR nTPM: 194.0
Samples: 4
Max nTPM: 228.9
Min nTPM: 150.2
RHH5234_R3606
185.9
RHH5206_R3577
228.9
RHH5263_R3635
210.8
RHH5298_R3664
150.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
