We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
108.4
nTPM
Monaco:
382.0
nTPM
Schmiedel:
104.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
108.4
HPA sample
nTPM
gdT-cell nTPM: 78.8
Samples: 6
Max nTPM: 94.9
Min nTPM: 64.9
P10809_1007
64.9
P10809_1022
90.6
P10809_1041
76.8
P10809_1060
72.8
P10809_1077
94.9
P10809_1098
72.7
MAIT T-cell nTPM: 80.6
Samples: 6
Max nTPM: 100.2
Min nTPM: 73.2
P10809_1006
78.0
P10809_1024
83.9
P10809_1043
73.7
P10809_1062
73.2
P10809_1083
74.6
P10809_1097
100.2
Memory CD4 T-cell nTPM: 76.0
Samples: 6
Max nTPM: 86.2
Min nTPM: 66.3
P10809_1014
75.7
P10809_1026
69.1
P10809_1045
82.5
P10809_1064
66.3
P10809_1086
86.2
P10809_1113
76.0
Memory CD8 T-cell nTPM: 81.1
Samples: 5
Max nTPM: 97.5
Min nTPM: 72.2
P10809_1012
80.2
P10809_1027
73.8
P10809_1046
72.2
P10809_1065
81.7
P10809_1111
97.5
Naive CD4 T-cell nTPM: 58.5
Samples: 6
Max nTPM: 70.0
Min nTPM: 51.1
P10809_1015
70.0
P10809_1030
60.8
P10809_1049
51.1
P10809_1068
58.1
P10809_1085
51.9
P10809_1112
59.2
Naive CD8 T-cell nTPM: 62.2
Samples: 6
Max nTPM: 95.8
Min nTPM: 46.8
P10809_1016
46.8
P10809_1031
70.0
P10809_1050
52.9
P10809_1069
58.4
P10809_1087
95.8
P10809_1110
49.4
T-reg nTPM: 108.4
Samples: 6
Max nTPM: 129.5
Min nTPM: 82.5
P10809_1018
108.4
P10809_1037
107.7
P10809_1056
104.8
P10809_1075
82.5
P10809_1094
117.7
P10809_1106
129.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
382.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 256.4
Samples: 4
Max nTPM: 293.0
Min nTPM: 187.8
RHH5202_R3573
280.9
RHH5230_R3602
293.0
RHH5259_R3631
187.8
RHH5288_R3660
264.0
Effector memory CD8 T-cell nTPM: 375.0
Samples: 4
Max nTPM: 391.0
Min nTPM: 347.5
RHH5203_R3574
391.0
RHH5231_R3603
374.2
RHH5260_R3632
347.5
RHH5289_R3661
387.2
MAIT T-cell nTPM: 344.3
Samples: 4
Max nTPM: 402.8
Min nTPM: 294.1
RHH5233_R3605
402.8
RHH5205_R3576
378.5
RHH5262_R3634
301.7
RHH5297_R3663
294.1
Memory CD4 T-cell TFH nTPM: 219.5
Samples: 4
Max nTPM: 269.9
Min nTPM: 186.9
RHH5300_R3666
200.5
RHH5236_R3608
220.6
RHH5265_R3637
186.9
RHH5208_R3579
269.9
Memory CD4 T-cell Th1 nTPM: 226.3
Samples: 4
Max nTPM: 234.0
Min nTPM: 218.3
RHH5210_R3581
234.0
RHH5302_R3668
218.3
RHH5238_R3610
222.3
RHH5267_R3639
230.4
Memory CD4 T-cell Th1/Th17 nTPM: 287.8
Samples: 4
Max nTPM: 329.1
Min nTPM: 245.3
RHH5303_R3669
286.3
RHH5211_R3582
329.1
RHH5239_R3611
290.3
RHH5268_R3640
245.3
Memory CD4 T-cell Th17 nTPM: 287.6
Samples: 4
Max nTPM: 323.9
Min nTPM: 259.4
RHH5304_R3670
307.1
RHH5212_R3583
259.4
RHH5240_R3612
323.9
RHH5269_R3641
259.9
Memory CD4 T-cell Th2 nTPM: 253.9
Samples: 4
Max nTPM: 265.4
Min nTPM: 237.8
RHH5305_R3671
250.8
RHH5213_R3584
261.4
RHH5241_R3613
237.8
RHH5270_R3642
265.4
Naive CD4 T-cell nTPM: 201.8
Samples: 4
Max nTPM: 212.3
Min nTPM: 195.2
RHH5306_R3672
199.6
RHH5214_R3585
200.1
RHH5242_R3614
195.2
RHH5271_R3643
212.3
Naive CD8 T-cell nTPM: 156.8
Samples: 4
Max nTPM: 192.1
Min nTPM: 140.6
RHH5201_R3572
192.1
RHH5229_R3601
140.6
RHH5258_R3630
143.8
RHH5287_R3659
150.8
Non-Vd2 gdTCR nTPM: 382.0
Samples: 4
Max nTPM: 459.4
Min nTPM: 322.7
RHH5235_R3607
416.4
RHH5264_R3636
322.7
RHH5207_R3578
459.4
RHH5299_R3665
329.4
T-reg nTPM: 223.0
Samples: 4
Max nTPM: 238.2
Min nTPM: 202.9
RHH5301_R3667
202.9
RHH5237_R3609
213.2
RHH5266_R3638
237.8
RHH5209_R3580
238.2
Terminal effector memory CD4 T-cell nTPM: 372.6
Samples: 2
Max nTPM: 414.2
Min nTPM: 330.9
RHH5243_R3615
414.2
RHH5272_R3644
330.9
Terminal effector memory CD8 T-cell nTPM: 374.6
Samples: 4
Max nTPM: 407.6
Min nTPM: 360.7
RHH5232_R3604
407.6
RHH5204_R3575
360.7
RHH5261_R3633
364.3
RHH5296_R3662
365.7
Vd2 gdTCR nTPM: 351.2
Samples: 4
Max nTPM: 450.2
Min nTPM: 254.6
RHH5234_R3606
350.1
RHH5206_R3577
450.2
RHH5263_R3635
349.7
RHH5298_R3664
254.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
