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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
105.3
nTPM
GTEx:
105.3
nTPM
FANTOM5:
94.0
Scaled Tags Per Million
Pig:
25.6
nTPM
Mouse:
42.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
105.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 105.3
Samples: 105
Max nTPM: 232.9
Min nTPM: 40.0
Std nTPM: 33.4
Median nTPM:
324_1
76 years, male
232.9
229_1
69 years, female
192.7
499_1
55 years, female
173.6
415_1
77 years, female
171.1
9_1
66 years, female
167.8
335_1
73 years, female
165.0
117_1
61 years, male
162.7
315_1
62 years, female
153.9
162_1
79 years, female
153.1
396_1
62 years, male
152.5
43_1
64 years, female
152.0
266_1
85 years, male
151.2
466_1
57 years, female
145.7
126_1
63 years, male
143.2
480_1
63 years, male
136.3
115_1
83 years, male
135.2
311_1
78 years, male
135.1
35_1
74 years, female
133.2
405_1
91 years, male
133.1
172_1
72 years, female
129.5
386_1
76 years, male
129.3
468_1
89 years, male
127.6
149_1
88 years, male
127.1
286_1
68 years, female
126.9
137_1
83 years, male
126.8
447_1
81 years, male
126.2
81_1
67 years, male
125.9
142_1
61 years, female
124.7
353_1
82 years, female
124.6
177_1
74 years, male
123.2
246_1
77 years, male
122.0
6_1
73 years, female
121.3
237_1
82 years, male
119.4
217_1
76 years, male
118.8
119_1
70 years, female
118.5
376_1
75 years, female
118.5
32_1
67 years, male
118.2
153_1
70 years, female
117.0
526_1
61 years, male
114.8
145_1
84 years, male
114.5
288_1
66 years, female
114.2
251_1
78 years, male
113.5
292_1
71 years, male
112.8
265_1
87 years, male
111.2
18_1
88 years, male
109.5
406_1
79 years, male
108.2
404_1
82 years, female
107.9
414_1
84 years, female
106.8
99_1
64 years, male
106.7
501_1
88 years, male
104.8
189_1
76 years, male
104.4
490_1
67 years, female
104.2
318_1
68 years, male
103.4
356_1
87 years, female
103.4
313_1
79 years, female
101.4
348_1
84 years, male
99.8
375_1
74 years, female
99.6
293_1
68 years, female
99.3
352_1
62 years, male
97.4
264_1
73 years, female
97.0
317_1
60 years, male
93.5
319_1
81 years, male
92.3
491_1
89 years, female
92.2
322_1
76 years, male
91.4
350_1
84 years, female
91.4
109_1
81 years, female
90.9
307_1
66 years, female
90.7
347_1
72 years, male
89.7
377_1
82 years, female
89.1
425_1
59 years, female
88.3
518_1
75 years, female
87.7
506_1
65 years, male
84.7
495_1
57 years, female
84.1
316_1
62 years, male
83.9
218_1
71 years, female
81.4
254_1
77 years, female
81.2
389_1
86 years, female
80.9
320_1
89 years, female
80.8
163_1
78 years, male
80.0
354_1
81 years, female
78.5
243_1
75 years, male
78.2
379_1
60 years, male
78.2
17_1
71 years, male
78.1
413_1
59 years, female
77.7
517_1
88 years, male
77.2
503_1
68 years, male
74.2
355_1
70 years, female
73.0
139_1
64 years, female
72.0
321_1
62 years, female
71.8
89_1
63 years, male
71.5
120_1
70 years, female
69.7
291_1
76 years, male
69.6
173_1
67 years, male
69.0
4_1
88 years, female
66.9
351_1
91 years, male
66.7
314_1
67 years, male
66.5
349_1
83 years, male
66.5
2_1
77 years, female
64.3
394_1
75 years, female
61.4
42_1
85 years, male
58.5
308_1
70 years, female
56.3
384_1
83 years, male
53.2
41_1
94 years, female
51.4
295_1
61 years, female
43.8
452_1
88 years, female
40.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
