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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
347.4
nTPM
Monaco:
78.4
nTPM
Schmiedel:
148.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
347.4
HPA sample
nTPM
gdT-cell nTPM: 211.0
Samples: 6
Max nTPM: 234.2
Min nTPM: 153.8
P10809_1007
153.8
P10809_1022
231.8
P10809_1041
234.2
P10809_1060
215.8
P10809_1077
206.0
P10809_1098
224.6
MAIT T-cell nTPM: 207.2
Samples: 6
Max nTPM: 252.8
Min nTPM: 134.3
P10809_1006
134.3
P10809_1024
252.8
P10809_1043
245.9
P10809_1062
207.4
P10809_1083
173.8
P10809_1097
229.0
Memory CD4 T-cell nTPM: 259.4
Samples: 6
Max nTPM: 321.3
Min nTPM: 187.8
P10809_1014
187.8
P10809_1026
321.3
P10809_1045
257.6
P10809_1064
271.2
P10809_1086
244.9
P10809_1113
273.3
Memory CD8 T-cell nTPM: 266.3
Samples: 5
Max nTPM: 318.2
Min nTPM: 184.7
P10809_1012
184.7
P10809_1027
290.6
P10809_1046
239.3
P10809_1065
298.8
P10809_1111
318.2
Naive CD4 T-cell nTPM: 204.2
Samples: 6
Max nTPM: 269.3
Min nTPM: 128.7
P10809_1015
128.7
P10809_1030
246.0
P10809_1049
269.3
P10809_1068
187.0
P10809_1085
192.6
P10809_1112
201.4
Naive CD8 T-cell nTPM: 214.5
Samples: 6
Max nTPM: 267.2
Min nTPM: 168.5
P10809_1016
168.5
P10809_1031
238.3
P10809_1050
191.7
P10809_1069
267.2
P10809_1087
229.5
P10809_1110
191.7
T-reg nTPM: 347.4
Samples: 6
Max nTPM: 466.1
Min nTPM: 240.8
P10809_1018
240.8
P10809_1037
322.6
P10809_1056
466.1
P10809_1075
331.0
P10809_1094
381.3
P10809_1106
342.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 46.6
Samples: 4
Max nTPM: 65.0
Min nTPM: 27.6
RHH5202_R3573
27.6
RHH5230_R3602
38.9
RHH5259_R3631
54.7
RHH5288_R3660
65.0
Effector memory CD8 T-cell nTPM: 46.3
Samples: 4
Max nTPM: 53.8
Min nTPM: 41.7
RHH5203_R3574
53.8
RHH5231_R3603
41.7
RHH5260_R3632
48.0
RHH5289_R3661
41.8
MAIT T-cell nTPM: 42.4
Samples: 4
Max nTPM: 53.7
Min nTPM: 33.8
RHH5233_R3605
40.3
RHH5205_R3576
41.9
RHH5262_R3634
33.8
RHH5297_R3663
53.7
Memory CD4 T-cell TFH nTPM: 50.4
Samples: 4
Max nTPM: 81.5
Min nTPM: 35.3
RHH5300_R3666
39.2
RHH5236_R3608
81.5
RHH5265_R3637
35.3
RHH5208_R3579
45.7
Memory CD4 T-cell Th1 nTPM: 69.5
Samples: 4
Max nTPM: 112.2
Min nTPM: 35.9
RHH5210_R3581
35.9
RHH5302_R3668
112.2
RHH5238_R3610
70.9
RHH5267_R3639
58.9
Memory CD4 T-cell Th1/Th17 nTPM: 53.3
Samples: 4
Max nTPM: 76.7
Min nTPM: 41.2
RHH5303_R3669
76.7
RHH5211_R3582
41.2
RHH5239_R3611
43.4
RHH5268_R3640
51.9
Memory CD4 T-cell Th17 nTPM: 52.0
Samples: 4
Max nTPM: 62.7
Min nTPM: 38.1
RHH5304_R3670
62.7
RHH5212_R3583
52.5
RHH5240_R3612
54.7
RHH5269_R3641
38.1
Memory CD4 T-cell Th2 nTPM: 57.9
Samples: 4
Max nTPM: 74.7
Min nTPM: 46.4
RHH5305_R3671
74.7
RHH5213_R3584
46.4
RHH5241_R3613
56.2
RHH5270_R3642
54.1
Naive CD4 T-cell nTPM: 52.8
Samples: 4
Max nTPM: 88.8
Min nTPM: 30.9
RHH5306_R3672
52.1
RHH5214_R3585
88.8
RHH5242_R3614
30.9
RHH5271_R3643
39.2
Naive CD8 T-cell nTPM: 36.8
Samples: 4
Max nTPM: 54.4
Min nTPM: 20.2
RHH5201_R3572
20.2
RHH5229_R3601
54.4
RHH5258_R3630
24.1
RHH5287_R3659
48.6
Non-Vd2 gdTCR nTPM: 55.6
Samples: 4
Max nTPM: 82.0
Min nTPM: 43.8
RHH5235_R3607
43.8
RHH5264_R3636
47.7
RHH5207_R3578
48.8
RHH5299_R3665
82.0
T-reg nTPM: 64.6
Samples: 4
Max nTPM: 100.1
Min nTPM: 42.8
RHH5301_R3667
100.1
RHH5237_R3609
42.8
RHH5266_R3638
57.4
RHH5209_R3580
57.9
Terminal effector memory CD4 T-cell nTPM: 37.9
Samples: 2
Max nTPM: 41.6
Min nTPM: 34.2
RHH5243_R3615
34.2
RHH5272_R3644
41.6
Terminal effector memory CD8 T-cell nTPM: 78.4
Samples: 4
Max nTPM: 140.1
Min nTPM: 33.2
RHH5232_R3604
33.2
RHH5204_R3575
140.1
RHH5261_R3633
77.4
RHH5296_R3662
62.7
Vd2 gdTCR nTPM: 76.0
Samples: 4
Max nTPM: 125.7
Min nTPM: 36.4
RHH5234_R3606
36.4
RHH5206_R3577
125.7
RHH5263_R3635
49.8
RHH5298_R3664
92.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
