HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:63.0 nTPM
HPA Brain:93.2 nTPM
GTEx:63.0 nTPM
FANTOM5:22.0 Scaled Tags Per Million
Pig:36.0 nTPM
Mouse:33.7 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041745
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.2
Sample id Sample description nTPM
Hippocampus
nTPM: 82.1
2148 Female, age 91, left hemisphere 90.9
2621 Female, age 67, right hemisphere 89.3
2529 Female, age 94, left hemisphere 82.4
1855 Male, age 76, left hemisphere 77.1
1911 Female, age 85, right hemisphere 77.0
1898 Male, age 80, left hemisphere 76.0
Dentate gyrus
nTPM: 88.2
1927 Female, age 91, both hemispheres 92.6
2531 Female, age 67, both hemispheres 92.0
2530 Female, age 94, left hemisphere 88.8
2246 Female, age 85, both hemispheres 86.0
2528 Male, age 74, both hemispheres 85.5
2010 Male, age 76, both hemispheres 84.2
Entorhinal gyrus
nTPM: 93.2
2613 Female, age 94, left hemisphere 112.4
2764 Male, age 80, right hemisphere 101.6
2686 Male, age 75, right hemisphere 93.4
1787 Male, age 76, left hemisphere 92.3
1938 Female, age 85, left hemisphere 84.9
2117 Female, age 91, right hemisphere 74.9
Hippocampus, CA1
nTPM: 83.5
2749 Male, age 80, left hemisphere 90.0
2082 Female, age 91, right hemisphere 87.9
1873 Female, age 85, both hemispheres 85.2
2527 Male, age 74, both hemispheres 82.4
2045 Male, age 76, both hemispheres 72.0
Hippocampus, CA2
nTPM: 85.2
1963 Male, age 80, left hemisphere 89.6
2437 Female, age 94, left hemisphere 89.1
1940 Female, age 85, left hemisphere 86.3
2113 Female, age 91, right hemisphere 84.0
1892 Male, age 76, both hemispheres 83.4
2249 Male, age 74, both hemispheres 78.6
Hippocampus, CA3
nTPM: 85.2
2620 Female, age 94, left hemisphere 104.2
2861 Female, age 67, both hemispheres 96.3
1867 Male, age 76, both hemispheres 82.5
1891 Female, age 85, both hemispheres 78.0
2137 Male, age 80, left hemisphere 76.9
2436 Male, age 74, both hemispheres 73.3
Parahippocampal cortex
nTPM: 91.1
2622 Female, age 67, right hemisphere 105.2
2693 Female, age 94, both hemispheres 101.6
2692 Male, age 74, both hemispheres 98.1
1990 Female, age 91, right hemisphere 96.6
2532 Female, age 72, left hemisphere 90.7
1933 Female, age 85, both hemispheres 87.7
1850 Male, age 80, both hemispheres 83.7
2245 Female, age 91, both hemispheres 82.9
2018 Male, age 76, both hemispheres 82.2
2250 Female, age 67, right hemisphere 82.0
Perirhinal gyrus
nTPM: 87.5
1794 Male, age 80, right hemisphere 94.6
2521 Female, age 94, right hemisphere 92.4
1847 Female, age 91, left hemisphere 88.8
1841 Female, age 85, right hemisphere 85.6
2848 Male, age 76, right hemisphere 76.1
Subiculum
nTPM: 78.6
2619 Male, age 74, both hemispheres 90.7
2729 Female, age 91, right hemisphere 87.3
1977 Female, age 85, both hemispheres 78.4
1901 Male, age 80, both hemispheres 74.5
2042 Male, age 76, both hemispheres 72.5
2438 Female, age 94, left hemisphere 68.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.0
Samples: 197

Max nTPM: 109.0
Min nTPM: 37.7
Std nTPM: 13.1
Median nTPM: 61.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 109.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 97.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 95.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 94.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 94.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 91.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 90.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 90.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 90.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 88.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.0
FF:10169-103B7 60 years, female 22.8
FF:10153-102I9 76 years, female 21.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 36.0
Pig sample Sample description nTPM
Subiculum
nTPM: 36.0
Samples: 4

Max nTPM: 45.1
Min nTPM: 26.9
Sample A Female 45.1
Sample B Female 36.2
Sample C Male 35.6
Sample D Male 26.9
Dorsal hippocampus
nTPM: 28.1
Samples: 4

Max nTPM: 32.6
Min nTPM: 21.1
Sample A Female 32.4
Sample B Female 32.6
Sample C Male 26.3
Sample D Male 21.1
Entorhinal cortex
nTPM: 34.5
Samples: 4

Max nTPM: 42.3
Min nTPM: 28.7
Sample A Female 34.7
Sample B Female 32.2
Sample C Male 42.3
Sample D Male 28.7
Ventral hippocampus
nTPM: 31.7
Samples: 4

Max nTPM: 41.3
Min nTPM: 27.7
Sample A Female 30.0
Sample B Female 27.9
Sample C Male 41.3
Sample D Male 27.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.4
Samples: 4

Max nTPM: 36.3
Min nTPM: 29.9
Sample A Male 29.9
Sample B Male 32.1
Sample C Female 36.3
Sample D Female 35.3
Hippocampal formation
nTPM: 33.7
Samples: 4

Max nTPM: 38.4
Min nTPM: 28.5
Sample A Male 29.7
Sample B Male 28.5
Sample C Female 38.4
Sample D Female 38.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
69095968 Antisense, RP_050324_02_F05, Mouse strain C57BL/6J (56 days, male) 9.5

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