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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
98.0
nTPM
Monaco:
218.1
nTPM
Schmiedel:
85.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.0
HPA sample
nTPM
gdT-cell nTPM: 98.0
Samples: 6
Max nTPM: 147.7
Min nTPM: 68.0
P10809_1007
90.7
P10809_1022
100.2
P10809_1041
147.7
P10809_1060
91.4
P10809_1077
68.0
P10809_1098
90.1
MAIT T-cell nTPM: 72.4
Samples: 6
Max nTPM: 87.5
Min nTPM: 57.2
P10809_1006
69.1
P10809_1024
66.5
P10809_1043
87.5
P10809_1062
83.7
P10809_1083
70.5
P10809_1097
57.2
Memory CD4 T-cell nTPM: 71.5
Samples: 6
Max nTPM: 97.9
Min nTPM: 55.1
P10809_1014
55.1
P10809_1026
97.9
P10809_1045
63.3
P10809_1064
84.7
P10809_1086
64.6
P10809_1113
63.3
Memory CD8 T-cell nTPM: 76.3
Samples: 5
Max nTPM: 98.3
Min nTPM: 59.5
P10809_1012
62.5
P10809_1027
79.5
P10809_1046
98.3
P10809_1065
81.8
P10809_1111
59.5
Naive CD4 T-cell nTPM: 60.3
Samples: 6
Max nTPM: 71.1
Min nTPM: 44.8
P10809_1015
44.8
P10809_1030
71.1
P10809_1049
69.1
P10809_1068
64.9
P10809_1085
57.0
P10809_1112
55.0
Naive CD8 T-cell nTPM: 63.2
Samples: 6
Max nTPM: 67.9
Min nTPM: 54.5
P10809_1016
54.5
P10809_1031
67.9
P10809_1050
64.5
P10809_1069
60.8
P10809_1087
65.4
P10809_1110
66.0
T-reg nTPM: 67.4
Samples: 6
Max nTPM: 87.1
Min nTPM: 49.1
P10809_1018
59.1
P10809_1037
85.5
P10809_1056
87.1
P10809_1075
61.1
P10809_1094
62.3
P10809_1106
49.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
218.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 112.5
Samples: 4
Max nTPM: 124.1
Min nTPM: 95.3
RHH5202_R3573
122.0
RHH5230_R3602
95.3
RHH5259_R3631
108.7
RHH5288_R3660
124.1
Effector memory CD8 T-cell nTPM: 192.3
Samples: 4
Max nTPM: 212.6
Min nTPM: 168.0
RHH5203_R3574
168.0
RHH5231_R3603
205.9
RHH5260_R3632
212.6
RHH5289_R3661
182.8
MAIT T-cell nTPM: 168.8
Samples: 4
Max nTPM: 178.9
Min nTPM: 151.2
RHH5233_R3605
151.2
RHH5205_R3576
178.3
RHH5262_R3634
178.9
RHH5297_R3663
166.9
Memory CD4 T-cell TFH nTPM: 121.4
Samples: 4
Max nTPM: 125.9
Min nTPM: 113.8
RHH5300_R3666
121.8
RHH5236_R3608
124.0
RHH5265_R3637
125.9
RHH5208_R3579
113.8
Memory CD4 T-cell Th1 nTPM: 134.5
Samples: 4
Max nTPM: 154.4
Min nTPM: 111.3
RHH5210_R3581
144.9
RHH5302_R3668
127.5
RHH5238_R3610
111.3
RHH5267_R3639
154.4
Memory CD4 T-cell Th1/Th17 nTPM: 153.0
Samples: 4
Max nTPM: 203.5
Min nTPM: 117.8
RHH5303_R3669
154.9
RHH5211_R3582
203.5
RHH5239_R3611
117.8
RHH5268_R3640
135.8
Memory CD4 T-cell Th17 nTPM: 160.3
Samples: 4
Max nTPM: 185.1
Min nTPM: 129.7
RHH5304_R3670
185.1
RHH5212_R3583
143.8
RHH5240_R3612
182.5
RHH5269_R3641
129.7
Memory CD4 T-cell Th2 nTPM: 153.5
Samples: 4
Max nTPM: 170.9
Min nTPM: 138.2
RHH5305_R3671
145.0
RHH5213_R3584
138.2
RHH5241_R3613
159.8
RHH5270_R3642
170.9
Naive CD4 T-cell nTPM: 137.9
Samples: 4
Max nTPM: 156.5
Min nTPM: 107.6
RHH5306_R3672
107.6
RHH5214_R3585
144.1
RHH5242_R3614
143.2
RHH5271_R3643
156.5
Naive CD8 T-cell nTPM: 113.7
Samples: 4
Max nTPM: 120.6
Min nTPM: 106.8
RHH5201_R3572
117.2
RHH5229_R3601
120.6
RHH5258_R3630
106.8
RHH5287_R3659
110.3
Non-Vd2 gdTCR nTPM: 201.3
Samples: 4
Max nTPM: 222.2
Min nTPM: 168.1
RHH5235_R3607
168.1
RHH5264_R3636
222.1
RHH5207_R3578
192.8
RHH5299_R3665
222.2
T-reg nTPM: 117.1
Samples: 4
Max nTPM: 122.3
Min nTPM: 109.2
RHH5301_R3667
109.2
RHH5237_R3609
122.3
RHH5266_R3638
120.3
RHH5209_R3580
116.7
Terminal effector memory CD4 T-cell nTPM: 196.4
Samples: 2
Max nTPM: 206.6
Min nTPM: 186.1
RHH5243_R3615
206.6
RHH5272_R3644
186.1
Terminal effector memory CD8 T-cell nTPM: 218.1
Samples: 4
Max nTPM: 266.7
Min nTPM: 176.5
RHH5232_R3604
190.4
RHH5204_R3575
176.5
RHH5261_R3633
238.9
RHH5296_R3662
266.7
Vd2 gdTCR nTPM: 179.8
Samples: 4
Max nTPM: 227.1
Min nTPM: 136.9
RHH5234_R3606
136.9
RHH5206_R3577
199.3
RHH5263_R3635
227.1
RHH5298_R3664
156.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
