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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
144.2
nTPM
Monaco:
322.8
nTPM
Schmiedel:
58.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.2
HPA sample
nTPM
gdT-cell nTPM: 126.7
Samples: 6
Max nTPM: 150.2
Min nTPM: 93.2
P10809_1007
93.2
P10809_1022
128.7
P10809_1041
145.9
P10809_1060
137.5
P10809_1077
104.9
P10809_1098
150.2
MAIT T-cell nTPM: 106.7
Samples: 6
Max nTPM: 130.9
Min nTPM: 60.5
P10809_1006
60.5
P10809_1024
122.9
P10809_1043
100.3
P10809_1062
130.9
P10809_1083
112.6
P10809_1097
112.8
Memory CD4 T-cell nTPM: 143.9
Samples: 6
Max nTPM: 177.3
Min nTPM: 88.9
P10809_1014
88.9
P10809_1026
177.3
P10809_1045
160.9
P10809_1064
150.8
P10809_1086
146.0
P10809_1113
139.2
Memory CD8 T-cell nTPM: 140.6
Samples: 5
Max nTPM: 168.1
Min nTPM: 64.2
P10809_1012
64.2
P10809_1027
163.9
P10809_1046
150.7
P10809_1065
155.9
P10809_1111
168.1
Naive CD4 T-cell nTPM: 139.6
Samples: 6
Max nTPM: 237.0
Min nTPM: 77.8
P10809_1015
77.8
P10809_1030
165.2
P10809_1049
237.0
P10809_1068
108.8
P10809_1085
129.6
P10809_1112
119.3
Naive CD8 T-cell nTPM: 138.9
Samples: 6
Max nTPM: 188.1
Min nTPM: 72.5
P10809_1016
72.5
P10809_1031
181.3
P10809_1050
188.1
P10809_1069
128.0
P10809_1087
151.2
P10809_1110
112.4
T-reg nTPM: 144.2
Samples: 6
Max nTPM: 198.6
Min nTPM: 87.1
P10809_1018
87.1
P10809_1037
140.5
P10809_1056
198.6
P10809_1075
143.1
P10809_1094
123.4
P10809_1106
172.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
322.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 235.6
Samples: 4
Max nTPM: 277.5
Min nTPM: 201.4
RHH5202_R3573
277.5
RHH5230_R3602
261.0
RHH5259_R3631
202.5
RHH5288_R3660
201.4
Effector memory CD8 T-cell nTPM: 322.8
Samples: 4
Max nTPM: 385.1
Min nTPM: 257.9
RHH5203_R3574
257.9
RHH5231_R3603
360.1
RHH5260_R3632
288.2
RHH5289_R3661
385.1
MAIT T-cell nTPM: 229.5
Samples: 4
Max nTPM: 249.5
Min nTPM: 206.0
RHH5233_R3605
249.5
RHH5205_R3576
227.1
RHH5262_R3634
235.5
RHH5297_R3663
206.0
Memory CD4 T-cell TFH nTPM: 306.4
Samples: 4
Max nTPM: 375.4
Min nTPM: 214.4
RHH5300_R3666
214.4
RHH5236_R3608
375.4
RHH5265_R3637
290.0
RHH5208_R3579
345.6
Memory CD4 T-cell Th1 nTPM: 220.0
Samples: 4
Max nTPM: 236.0
Min nTPM: 186.4
RHH5210_R3581
236.0
RHH5302_R3668
223.5
RHH5238_R3610
233.9
RHH5267_R3639
186.4
Memory CD4 T-cell Th1/Th17 nTPM: 223.0
Samples: 4
Max nTPM: 263.9
Min nTPM: 175.7
RHH5303_R3669
231.2
RHH5211_R3582
263.9
RHH5239_R3611
175.7
RHH5268_R3640
221.3
Memory CD4 T-cell Th17 nTPM: 266.7
Samples: 4
Max nTPM: 327.8
Min nTPM: 186.1
RHH5304_R3670
228.5
RHH5212_R3583
324.3
RHH5240_R3612
327.8
RHH5269_R3641
186.1
Memory CD4 T-cell Th2 nTPM: 239.9
Samples: 4
Max nTPM: 253.2
Min nTPM: 212.4
RHH5305_R3671
212.4
RHH5213_R3584
253.2
RHH5241_R3613
246.3
RHH5270_R3642
247.5
Naive CD4 T-cell nTPM: 242.9
Samples: 4
Max nTPM: 261.7
Min nTPM: 204.8
RHH5306_R3672
204.8
RHH5214_R3585
261.7
RHH5242_R3614
251.5
RHH5271_R3643
253.7
Naive CD8 T-cell nTPM: 241.6
Samples: 4
Max nTPM: 257.0
Min nTPM: 230.2
RHH5201_R3572
257.0
RHH5229_R3601
237.5
RHH5258_R3630
230.2
RHH5287_R3659
241.8
Non-Vd2 gdTCR nTPM: 268.8
Samples: 4
Max nTPM: 338.5
Min nTPM: 205.0
RHH5235_R3607
275.1
RHH5264_R3636
338.5
RHH5207_R3578
256.4
RHH5299_R3665
205.0
T-reg nTPM: 267.5
Samples: 4
Max nTPM: 384.2
Min nTPM: 220.1
RHH5301_R3667
220.1
RHH5237_R3609
384.2
RHH5266_R3638
225.4
RHH5209_R3580
240.4
Terminal effector memory CD4 T-cell nTPM: 213.8
Samples: 2
Max nTPM: 219.5
Min nTPM: 208.0
RHH5243_R3615
208.0
RHH5272_R3644
219.5
Terminal effector memory CD8 T-cell nTPM: 257.2
Samples: 4
Max nTPM: 291.2
Min nTPM: 202.1
RHH5232_R3604
275.4
RHH5204_R3575
202.1
RHH5261_R3633
291.2
RHH5296_R3662
260.1
Vd2 gdTCR nTPM: 253.3
Samples: 4
Max nTPM: 284.1
Min nTPM: 208.9
RHH5234_R3606
244.4
RHH5206_R3577
284.1
RHH5263_R3635
275.9
RHH5298_R3664
208.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.