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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.4
nTPM
Monaco:
76.8
nTPM
Schmiedel:
148.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.4
HPA sample
nTPM
gdT-cell nTPM: 41.6
Samples: 6
Max nTPM: 49.7
Min nTPM: 30.9
P10809_1007
30.9
P10809_1022
43.2
P10809_1041
49.7
P10809_1060
39.2
P10809_1077
37.4
P10809_1098
49.3
MAIT T-cell nTPM: 58.2
Samples: 6
Max nTPM: 68.0
Min nTPM: 44.4
P10809_1006
59.3
P10809_1024
68.0
P10809_1043
61.9
P10809_1062
56.2
P10809_1083
44.4
P10809_1097
59.4
Memory CD4 T-cell nTPM: 50.5
Samples: 6
Max nTPM: 60.2
Min nTPM: 36.4
P10809_1014
45.4
P10809_1026
57.8
P10809_1045
60.2
P10809_1064
48.7
P10809_1086
36.4
P10809_1113
54.3
Memory CD8 T-cell nTPM: 38.5
Samples: 5
Max nTPM: 57.6
Min nTPM: 27.8
P10809_1012
39.4
P10809_1027
32.5
P10809_1046
57.6
P10809_1065
27.8
P10809_1111
35.1
Naive CD4 T-cell nTPM: 53.5
Samples: 6
Max nTPM: 71.6
Min nTPM: 44.2
P10809_1015
46.6
P10809_1030
56.7
P10809_1049
71.6
P10809_1068
45.4
P10809_1085
44.2
P10809_1112
56.3
Naive CD8 T-cell nTPM: 49.1
Samples: 6
Max nTPM: 60.1
Min nTPM: 33.2
P10809_1016
51.0
P10809_1031
49.1
P10809_1050
60.1
P10809_1069
47.7
P10809_1087
33.2
P10809_1110
53.6
T-reg nTPM: 68.4
Samples: 6
Max nTPM: 91.1
Min nTPM: 54.8
P10809_1018
64.4
P10809_1037
54.8
P10809_1056
78.2
P10809_1075
66.7
P10809_1094
91.1
P10809_1106
54.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.9
Samples: 4
Max nTPM: 67.6
Min nTPM: 49.2
RHH5202_R3573
49.2
RHH5230_R3602
67.6
RHH5259_R3631
57.3
RHH5288_R3660
57.6
Effector memory CD8 T-cell nTPM: 66.5
Samples: 4
Max nTPM: 77.2
Min nTPM: 56.6
RHH5203_R3574
77.2
RHH5231_R3603
56.6
RHH5260_R3632
57.2
RHH5289_R3661
74.9
MAIT T-cell nTPM: 71.3
Samples: 4
Max nTPM: 77.6
Min nTPM: 56.6
RHH5233_R3605
56.6
RHH5205_R3576
74.4
RHH5262_R3634
76.4
RHH5297_R3663
77.6
Memory CD4 T-cell TFH nTPM: 75.9
Samples: 4
Max nTPM: 83.3
Min nTPM: 64.6
RHH5300_R3666
64.6
RHH5236_R3608
75.2
RHH5265_R3637
80.3
RHH5208_R3579
83.3
Memory CD4 T-cell Th1 nTPM: 52.8
Samples: 4
Max nTPM: 63.5
Min nTPM: 46.5
RHH5210_R3581
46.5
RHH5302_R3668
63.5
RHH5238_R3610
47.2
RHH5267_R3639
54.1
Memory CD4 T-cell Th1/Th17 nTPM: 63.8
Samples: 4
Max nTPM: 91.8
Min nTPM: 29.4
RHH5303_R3669
70.3
RHH5211_R3582
91.8
RHH5239_R3611
29.4
RHH5268_R3640
63.6
Memory CD4 T-cell Th17 nTPM: 60.2
Samples: 4
Max nTPM: 66.3
Min nTPM: 52.4
RHH5304_R3670
66.3
RHH5212_R3583
62.0
RHH5240_R3612
52.4
RHH5269_R3641
60.2
Memory CD4 T-cell Th2 nTPM: 70.6
Samples: 4
Max nTPM: 79.0
Min nTPM: 50.9
RHH5305_R3671
76.1
RHH5213_R3584
76.5
RHH5241_R3613
50.9
RHH5270_R3642
79.0
Naive CD4 T-cell nTPM: 66.8
Samples: 4
Max nTPM: 73.6
Min nTPM: 59.2
RHH5306_R3672
73.6
RHH5214_R3585
69.1
RHH5242_R3614
59.2
RHH5271_R3643
65.1
Naive CD8 T-cell nTPM: 76.8
Samples: 4
Max nTPM: 91.9
Min nTPM: 43.9
RHH5201_R3572
91.9
RHH5229_R3601
43.9
RHH5258_R3630
84.3
RHH5287_R3659
87.0
Non-Vd2 gdTCR nTPM: 50.0
Samples: 4
Max nTPM: 55.3
Min nTPM: 44.6
RHH5235_R3607
55.3
RHH5264_R3636
54.7
RHH5207_R3578
45.3
RHH5299_R3665
44.6
T-reg nTPM: 69.3
Samples: 4
Max nTPM: 76.0
Min nTPM: 66.1
RHH5301_R3667
67.3
RHH5237_R3609
76.0
RHH5266_R3638
66.1
RHH5209_R3580
67.6
Terminal effector memory CD4 T-cell nTPM: 49.9
Samples: 2
Max nTPM: 50.3
Min nTPM: 49.5
RHH5243_R3615
49.5
RHH5272_R3644
50.3
Terminal effector memory CD8 T-cell nTPM: 52.9
Samples: 4
Max nTPM: 57.6
Min nTPM: 46.1
RHH5232_R3604
57.6
RHH5204_R3575
54.8
RHH5261_R3633
46.1
RHH5296_R3662
53.1
Vd2 gdTCR nTPM: 52.5
Samples: 4
Max nTPM: 58.5
Min nTPM: 43.2
RHH5234_R3606
57.8
RHH5206_R3577
58.5
RHH5263_R3635
50.6
RHH5298_R3664
43.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
