HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:73.8 nTPM
HPA Brain:92.8 nTPM
GTEx:73.8 nTPM
FANTOM5:143.8 Scaled Tags Per Million
Pig:41.6 nTPM
Mouse:37.2 nTPM
Allen mouse:7.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021641Antibody HPA024553
Glial cells LowLow
Neuronal cells HighNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 92.8
Sample id Sample description nTPM
Hippocampus
nTPM: 92.8
2148 Female, age 91, left hemisphere 114.6
2621 Female, age 67, right hemisphere 96.7
2529 Female, age 94, left hemisphere 91.7
1855 Male, age 76, left hemisphere 91.4
1898 Male, age 80, left hemisphere 82.1
1911 Female, age 85, right hemisphere 80.1
Dentate gyrus
nTPM: 85.3
2531 Female, age 67, both hemispheres 110.4
1927 Female, age 91, both hemispheres 103.7
2010 Male, age 76, both hemispheres 76.1
2528 Male, age 74, both hemispheres 75.3
2246 Female, age 85, both hemispheres 74.0
2530 Female, age 94, left hemisphere 72.3
Entorhinal gyrus
nTPM: 91.8
2613 Female, age 94, left hemisphere 106.5
2686 Male, age 75, right hemisphere 104.3
1938 Female, age 85, left hemisphere 94.7
2764 Male, age 80, right hemisphere 92.1
1787 Male, age 76, left hemisphere 81.6
2117 Female, age 91, right hemisphere 71.8
Hippocampus, CA1
nTPM: 88.7
2045 Male, age 76, both hemispheres 92.6
2749 Male, age 80, left hemisphere 92.3
2082 Female, age 91, right hemisphere 89.1
2527 Male, age 74, both hemispheres 85.0
1873 Female, age 85, both hemispheres 84.5
Hippocampus, CA2
nTPM: 83.6
1963 Male, age 80, left hemisphere 131.3
2113 Female, age 91, right hemisphere 88.6
2437 Female, age 94, left hemisphere 78.5
1892 Male, age 76, both hemispheres 72.9
1940 Female, age 85, left hemisphere 71.8
2249 Male, age 74, both hemispheres 58.6
Hippocampus, CA3
nTPM: 87.1
2861 Female, age 67, both hemispheres 124.5
2620 Female, age 94, left hemisphere 99.5
2137 Male, age 80, left hemisphere 88.7
1867 Male, age 76, both hemispheres 75.9
1891 Female, age 85, both hemispheres 70.6
2436 Male, age 74, both hemispheres 63.2
Parahippocampal cortex
nTPM: 85.7
2245 Female, age 91, both hemispheres 105.3
2622 Female, age 67, right hemisphere 96.6
1933 Female, age 85, both hemispheres 91.1
1850 Male, age 80, both hemispheres 84.3
2250 Female, age 67, right hemisphere 83.9
2532 Female, age 72, left hemisphere 83.2
2693 Female, age 94, both hemispheres 82.3
2018 Male, age 76, both hemispheres 82.0
1990 Female, age 91, right hemisphere 79.7
2692 Male, age 74, both hemispheres 68.6
Perirhinal gyrus
nTPM: 91.7
1847 Female, age 91, left hemisphere 108.1
1794 Male, age 80, right hemisphere 91.6
2521 Female, age 94, right hemisphere 88.5
1841 Female, age 85, right hemisphere 85.1
2848 Male, age 76, right hemisphere 85.1
Subiculum
nTPM: 69.9
2729 Female, age 91, right hemisphere 85.9
1977 Female, age 85, both hemispheres 79.0
2619 Male, age 74, both hemispheres 70.1
2042 Male, age 76, both hemispheres 62.8
2438 Female, age 94, left hemisphere 61.2
1901 Male, age 80, both hemispheres 60.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.8
Samples: 197

Max nTPM: 200.3
Min nTPM: 13.5
Std nTPM: 33.0
Median nTPM: 71.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 200.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 194.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 180.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 163.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 154.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 147.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 146.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 142.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 130.8
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 129.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 128.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.8
FF:10153-102I9 76 years, female 164.1
FF:10169-103B7 60 years, female 123.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 41.6
Pig sample Sample description nTPM
Subiculum
nTPM: 36.1
Samples: 4

Max nTPM: 50.1
Min nTPM: 29.0
Sample A Female 50.1
Sample B Female 33.6
Sample C Male 31.7
Sample D Male 29.0
Dorsal hippocampus
nTPM: 41.6
Samples: 4

Max nTPM: 53.4
Min nTPM: 22.5
Sample A Female 46.7
Sample B Female 53.4
Sample C Male 22.5
Sample D Male 43.8
Entorhinal cortex
nTPM: 36.0
Samples: 4

Max nTPM: 44.4
Min nTPM: 28.3
Sample A Female 39.5
Sample B Female 31.9
Sample C Male 44.4
Sample D Male 28.3
Ventral hippocampus
nTPM: 38.0
Samples: 4

Max nTPM: 54.1
Min nTPM: 27.0
Sample A Female 27.0
Sample B Female 32.2
Sample C Male 38.6
Sample D Male 54.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.2
Samples: 4

Max nTPM: 40.5
Min nTPM: 33.1
Sample A Male 40.5
Sample B Male 37.0
Sample C Female 38.3
Sample D Female 33.1
Hippocampal formation
nTPM: 36.8
Samples: 4

Max nTPM: 39.9
Min nTPM: 33.5
Sample A Male 39.9
Sample B Male 37.0
Sample C Female 33.5
Sample D Female 36.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.3
69873355 Antisense, RP_050512_01_A12, Mouse strain C57BL/6J (56 days, male) 7.3

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