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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
269.7
nTPM
Monaco:
378.7
nTPM
Schmiedel:
310.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
269.7
HPA sample
nTPM
gdT-cell nTPM: 171.4
Samples: 6
Max nTPM: 206.8
Min nTPM: 144.0
P10809_1007
144.0
P10809_1022
206.8
P10809_1041
200.5
P10809_1060
156.4
P10809_1077
159.2
P10809_1098
161.3
MAIT T-cell nTPM: 144.5
Samples: 6
Max nTPM: 192.6
Min nTPM: 111.0
P10809_1006
114.9
P10809_1024
192.6
P10809_1043
147.4
P10809_1062
145.7
P10809_1083
111.0
P10809_1097
155.1
Memory CD4 T-cell nTPM: 140.1
Samples: 6
Max nTPM: 156.0
Min nTPM: 112.0
P10809_1014
112.0
P10809_1026
156.0
P10809_1045
146.6
P10809_1064
142.6
P10809_1086
147.0
P10809_1113
136.2
Memory CD8 T-cell nTPM: 155.6
Samples: 5
Max nTPM: 197.6
Min nTPM: 123.1
P10809_1012
123.1
P10809_1027
197.6
P10809_1046
149.1
P10809_1065
180.9
P10809_1111
127.3
Naive CD4 T-cell nTPM: 121.6
Samples: 6
Max nTPM: 154.0
Min nTPM: 105.4
P10809_1015
105.4
P10809_1030
131.6
P10809_1049
154.0
P10809_1068
105.4
P10809_1085
120.2
P10809_1112
112.7
Naive CD8 T-cell nTPM: 135.8
Samples: 6
Max nTPM: 171.0
Min nTPM: 100.7
P10809_1016
100.7
P10809_1031
128.7
P10809_1050
151.4
P10809_1069
171.0
P10809_1087
157.0
P10809_1110
106.1
T-reg nTPM: 269.7
Samples: 6
Max nTPM: 318.9
Min nTPM: 186.3
P10809_1018
186.3
P10809_1037
318.9
P10809_1056
275.1
P10809_1075
280.4
P10809_1094
265.9
P10809_1106
291.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
378.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 283.2
Samples: 4
Max nTPM: 367.3
Min nTPM: 190.2
RHH5202_R3573
303.6
RHH5230_R3602
271.6
RHH5259_R3631
190.2
RHH5288_R3660
367.3
Effector memory CD8 T-cell nTPM: 370.6
Samples: 4
Max nTPM: 412.3
Min nTPM: 316.7
RHH5203_R3574
379.5
RHH5231_R3603
373.8
RHH5260_R3632
316.7
RHH5289_R3661
412.3
MAIT T-cell nTPM: 311.7
Samples: 4
Max nTPM: 325.2
Min nTPM: 294.5
RHH5233_R3605
302.2
RHH5205_R3576
294.5
RHH5262_R3634
325.2
RHH5297_R3663
324.9
Memory CD4 T-cell TFH nTPM: 314.4
Samples: 4
Max nTPM: 339.1
Min nTPM: 271.8
RHH5300_R3666
326.2
RHH5236_R3608
339.1
RHH5265_R3637
320.5
RHH5208_R3579
271.8
Memory CD4 T-cell Th1 nTPM: 270.8
Samples: 4
Max nTPM: 310.4
Min nTPM: 216.8
RHH5210_R3581
279.9
RHH5302_R3668
310.4
RHH5238_R3610
216.8
RHH5267_R3639
276.2
Memory CD4 T-cell Th1/Th17 nTPM: 300.1
Samples: 4
Max nTPM: 358.2
Min nTPM: 223.2
RHH5303_R3669
351.3
RHH5211_R3582
358.2
RHH5239_R3611
223.2
RHH5268_R3640
267.6
Memory CD4 T-cell Th17 nTPM: 280.5
Samples: 4
Max nTPM: 321.6
Min nTPM: 242.4
RHH5304_R3670
321.6
RHH5212_R3583
281.1
RHH5240_R3612
242.4
RHH5269_R3641
276.9
Memory CD4 T-cell Th2 nTPM: 344.4
Samples: 4
Max nTPM: 366.9
Min nTPM: 322.6
RHH5305_R3671
357.0
RHH5213_R3584
330.9
RHH5241_R3613
366.9
RHH5270_R3642
322.6
Naive CD4 T-cell nTPM: 274.7
Samples: 4
Max nTPM: 323.0
Min nTPM: 243.1
RHH5306_R3672
283.0
RHH5214_R3585
323.0
RHH5242_R3614
249.7
RHH5271_R3643
243.1
Naive CD8 T-cell nTPM: 249.5
Samples: 4
Max nTPM: 292.1
Min nTPM: 185.3
RHH5201_R3572
292.1
RHH5229_R3601
185.3
RHH5258_R3630
247.4
RHH5287_R3659
273.0
Non-Vd2 gdTCR nTPM: 378.8
Samples: 4
Max nTPM: 435.1
Min nTPM: 270.9
RHH5235_R3607
270.9
RHH5264_R3636
394.9
RHH5207_R3578
435.1
RHH5299_R3665
414.1
T-reg nTPM: 344.8
Samples: 4
Max nTPM: 375.2
Min nTPM: 300.8
RHH5301_R3667
375.2
RHH5237_R3609
346.1
RHH5266_R3638
357.0
RHH5209_R3580
300.8
Terminal effector memory CD4 T-cell nTPM: 268.2
Samples: 2
Max nTPM: 339.6
Min nTPM: 196.8
RHH5243_R3615
196.8
RHH5272_R3644
339.6
Terminal effector memory CD8 T-cell nTPM: 355.7
Samples: 4
Max nTPM: 418.0
Min nTPM: 286.1
RHH5232_R3604
311.3
RHH5204_R3575
407.4
RHH5261_R3633
286.1
RHH5296_R3662
418.0
Vd2 gdTCR nTPM: 342.0
Samples: 4
Max nTPM: 372.0
Min nTPM: 325.2
RHH5234_R3606
325.2
RHH5206_R3577
372.0
RHH5263_R3635
326.3
RHH5298_R3664
344.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.