HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:18.8 nTPM
HPA Brain:34.6 nTPM
GTEx:18.8 nTPM
FANTOM5:47.2 Scaled Tags Per Million
Pig:25.3 nTPM
Mouse:39.1 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042377
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.6
Sample id Sample description nTPM
Hippocampus
nTPM: 31.4
2529 Female, age 94, left hemisphere 35.2
2621 Female, age 67, right hemisphere 33.6
1898 Male, age 80, left hemisphere 31.7
2148 Female, age 91, left hemisphere 30.0
1911 Female, age 85, right hemisphere 29.5
1855 Male, age 76, left hemisphere 28.2
Dentate gyrus
nTPM: 29.2
2010 Male, age 76, both hemispheres 32.4
2528 Male, age 74, both hemispheres 31.7
2530 Female, age 94, left hemisphere 31.2
2246 Female, age 85, both hemispheres 29.3
1927 Female, age 91, both hemispheres 26.4
2531 Female, age 67, both hemispheres 24.0
Entorhinal gyrus
nTPM: 32.8
2117 Female, age 91, right hemisphere 45.2
1787 Male, age 76, left hemisphere 33.1
1938 Female, age 85, left hemisphere 33.1
2764 Male, age 80, right hemisphere 31.4
2613 Female, age 94, left hemisphere 27.8
2686 Male, age 75, right hemisphere 26.4
Hippocampus, CA1
nTPM: 30.8
2527 Male, age 74, both hemispheres 40.5
2082 Female, age 91, right hemisphere 29.8
2045 Male, age 76, both hemispheres 29.1
1873 Female, age 85, both hemispheres 27.3
2749 Male, age 80, left hemisphere 27.3
Hippocampus, CA2
nTPM: 33.1
2249 Male, age 74, both hemispheres 47.4
1963 Male, age 80, left hemisphere 34.4
1892 Male, age 76, both hemispheres 31.3
2113 Female, age 91, right hemisphere 29.9
2437 Female, age 94, left hemisphere 28.8
1940 Female, age 85, left hemisphere 26.7
Hippocampus, CA3
nTPM: 31.9
2436 Male, age 74, both hemispheres 48.5
2620 Female, age 94, left hemisphere 35.3
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 29.3
2137 Male, age 80, left hemisphere 23.4
2861 Female, age 67, both hemispheres 23.1
Parahippocampal cortex
nTPM: 30.2
2250 Female, age 67, right hemisphere 33.5
1990 Female, age 91, right hemisphere 33.3
1850 Male, age 80, both hemispheres 33.0
2692 Male, age 74, both hemispheres 31.9
2532 Female, age 72, left hemisphere 31.1
2245 Female, age 91, both hemispheres 29.0
2018 Male, age 76, both hemispheres 28.6
1933 Female, age 85, both hemispheres 28.3
2622 Female, age 67, right hemisphere 26.6
2693 Female, age 94, both hemispheres 26.2
Perirhinal gyrus
nTPM: 31.7
2521 Female, age 94, right hemisphere 33.3
1794 Male, age 80, right hemisphere 32.4
2848 Male, age 76, right hemisphere 32.0
1847 Female, age 91, left hemisphere 30.6
1841 Female, age 85, right hemisphere 30.1
Subiculum
nTPM: 34.6
2619 Male, age 74, both hemispheres 37.9
2438 Female, age 94, left hemisphere 36.6
1977 Female, age 85, both hemispheres 35.2
2729 Female, age 91, right hemisphere 33.3
2042 Male, age 76, both hemispheres 33.0
1901 Male, age 80, both hemispheres 31.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.8
Samples: 197

Max nTPM: 47.6
Min nTPM: 8.3
Std nTPM: 5.1
Median nTPM: 18.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 47.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 31.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 29.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 29.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 29.0
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 28.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.1
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 28.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 28.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 27.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 27.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.2
FF:10169-103B7 60 years, female 49.8
FF:10153-102I9 76 years, female 44.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.3
Pig sample Sample description nTPM
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 28.2
Min nTPM: 22.6
Sample A Female 28.2
Sample B Female 22.6
Sample C Male 23.4
Sample D Male 23.2
Dorsal hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 30.4
Min nTPM: 19.3
Sample A Female 30.4
Sample B Female 23.8
Sample C Male 27.7
Sample D Male 19.3
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 25.8
Min nTPM: 20.8
Sample A Female 25.8
Sample B Female 23.6
Sample C Male 24.3
Sample D Male 20.8
Ventral hippocampus
nTPM: 23.8
Samples: 4

Max nTPM: 27.2
Min nTPM: 19.3
Sample A Female 27.2
Sample B Female 19.3
Sample C Male 25.6
Sample D Male 23.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.6
Samples: 4

Max nTPM: 39.7
Min nTPM: 26.0
Sample A Male 30.7
Sample B Male 26.0
Sample C Female 34.1
Sample D Female 39.7
Hippocampal formation
nTPM: 39.1
Samples: 4

Max nTPM: 45.2
Min nTPM: 34.4
Sample A Male 37.5
Sample B Male 45.2
Sample C Female 39.3
Sample D Female 34.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
70474761 Antisense, RP_050614_04_H10, Mouse strain C57BL/6J (56 days, male) 2.5
73930852 Antisense, RP_051214_04_D05, Mouse strain C57BL/6J (56 days, male) 1.6

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