HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:75.6 nTPM
HPA Brain:109.9 nTPM
GTEx:75.6 nTPM
FANTOM5:108.3 Scaled Tags Per Million
Pig:124.9 nTPM
Mouse:231.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040959Antibody HPA043401
Glial cells LowMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.9
Sample id Sample description nTPM
Hippocampus
nTPM: 90.8
2529 Female, age 94, left hemisphere 123.2
2621 Female, age 67, right hemisphere 98.0
1898 Male, age 80, left hemisphere 93.8
1911 Female, age 85, right hemisphere 87.3
1855 Male, age 76, left hemisphere 72.1
2148 Female, age 91, left hemisphere 70.2
Dentate gyrus
nTPM: 83.2
2530 Female, age 94, left hemisphere 108.2
2010 Male, age 76, both hemispheres 84.2
2246 Female, age 85, both hemispheres 82.4
2528 Male, age 74, both hemispheres 79.1
2531 Female, age 67, both hemispheres 76.7
1927 Female, age 91, both hemispheres 68.7
Entorhinal gyrus
nTPM: 103.9
2117 Female, age 91, right hemisphere 118.0
2686 Male, age 75, right hemisphere 113.7
2764 Male, age 80, right hemisphere 109.9
1787 Male, age 76, left hemisphere 106.8
1938 Female, age 85, left hemisphere 94.0
2613 Female, age 94, left hemisphere 80.9
Hippocampus, CA1
nTPM: 80.4
2527 Male, age 74, both hemispheres 98.6
2749 Male, age 80, left hemisphere 94.0
1873 Female, age 85, both hemispheres 87.4
2082 Female, age 91, right hemisphere 70.9
2045 Male, age 76, both hemispheres 51.3
Hippocampus, CA2
nTPM: 95.1
2437 Female, age 94, left hemisphere 102.3
1963 Male, age 80, left hemisphere 101.8
2249 Male, age 74, both hemispheres 101.6
1892 Male, age 76, both hemispheres 92.9
1940 Female, age 85, left hemisphere 92.4
2113 Female, age 91, right hemisphere 79.7
Hippocampus, CA3
nTPM: 87.5
2436 Male, age 74, both hemispheres 105.2
1891 Female, age 85, both hemispheres 98.9
2620 Female, age 94, left hemisphere 91.0
2137 Male, age 80, left hemisphere 87.3
1867 Male, age 76, both hemispheres 86.6
2861 Female, age 67, both hemispheres 56.0
Parahippocampal cortex
nTPM: 100.6
2532 Female, age 72, left hemisphere 125.2
1850 Male, age 80, both hemispheres 120.8
2692 Male, age 74, both hemispheres 106.4
1990 Female, age 91, right hemisphere 101.2
2245 Female, age 91, both hemispheres 100.6
2693 Female, age 94, both hemispheres 99.8
1933 Female, age 85, both hemispheres 97.5
2250 Female, age 67, right hemisphere 87.5
2018 Male, age 76, both hemispheres 86.7
2622 Female, age 67, right hemisphere 80.1
Perirhinal gyrus
nTPM: 109.3
2848 Male, age 76, right hemisphere 123.9
1841 Female, age 85, right hemisphere 120.0
1794 Male, age 80, right hemisphere 114.4
2521 Female, age 94, right hemisphere 99.6
1847 Female, age 91, left hemisphere 88.7
Subiculum
nTPM: 109.9
2438 Female, age 94, left hemisphere 132.1
1901 Male, age 80, both hemispheres 121.3
2042 Male, age 76, both hemispheres 120.2
1977 Female, age 85, both hemispheres 107.0
2619 Male, age 74, both hemispheres 106.8
2729 Female, age 91, right hemisphere 72.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.6
Samples: 197

Max nTPM: 182.9
Min nTPM: 21.1
Std nTPM: 26.4
Median nTPM: 70.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 182.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 180.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 153.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 144.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 137.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 135.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 132.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 128.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 128.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 127.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 125.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.3
FF:10153-102I9 76 years, female 124.2
FF:10169-103B7 60 years, female 92.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 124.9
Pig sample Sample description nTPM
Subiculum
nTPM: 73.4
Samples: 4

Max nTPM: 103.2
Min nTPM: 53.9
Sample A Female 103.2
Sample B Female 71.5
Sample C Male 53.9
Sample D Male 64.8
Dorsal hippocampus
nTPM: 78.5
Samples: 4

Max nTPM: 105.3
Min nTPM: 46.5
Sample A Female 105.3
Sample B Female 71.8
Sample C Male 90.2
Sample D Male 46.5
Entorhinal cortex
nTPM: 124.9
Samples: 4

Max nTPM: 150.1
Min nTPM: 110.4
Sample A Female 122.2
Sample B Female 150.1
Sample C Male 110.4
Sample D Male 116.9
Ventral hippocampus
nTPM: 63.7
Samples: 4

Max nTPM: 74.2
Min nTPM: 51.7
Sample A Female 74.2
Sample B Female 51.7
Sample C Male 64.3
Sample D Male 64.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 231.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 231.9
Samples: 4

Max nTPM: 306.9
Min nTPM: 183.8
Sample A Male 248.2
Sample B Male 306.9
Sample C Female 188.5
Sample D Female 183.8
Hippocampal formation
nTPM: 115.9
Samples: 4

Max nTPM: 134.6
Min nTPM: 101.7
Sample A Male 134.6
Sample B Male 101.7
Sample C Female 106.6
Sample D Female 120.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763540 Antisense, RP_050921_02_B09, Mouse strain C57BL/6J (56 days, male) 0.0

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