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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
51.3
nTPM
Monaco:
167.7
nTPM
Schmiedel:
212.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
51.3
HPA sample
nTPM
gdT-cell nTPM: 49.2
Samples: 6
Max nTPM: 62.5
Min nTPM: 37.4
P10809_1007
62.5
P10809_1022
53.3
P10809_1041
53.9
P10809_1060
39.0
P10809_1077
37.4
P10809_1098
49.0
MAIT T-cell nTPM: 35.1
Samples: 6
Max nTPM: 48.3
Min nTPM: 28.5
P10809_1006
31.8
P10809_1024
34.1
P10809_1043
32.6
P10809_1062
28.5
P10809_1083
35.4
P10809_1097
48.3
Memory CD4 T-cell nTPM: 31.2
Samples: 6
Max nTPM: 36.2
Min nTPM: 24.3
P10809_1014
36.2
P10809_1026
26.8
P10809_1045
35.6
P10809_1064
32.6
P10809_1086
31.8
P10809_1113
24.3
Memory CD8 T-cell nTPM: 51.3
Samples: 5
Max nTPM: 54.8
Min nTPM: 46.7
P10809_1012
54.8
P10809_1027
54.6
P10809_1046
53.2
P10809_1065
47.4
P10809_1111
46.7
Naive CD4 T-cell nTPM: 29.4
Samples: 6
Max nTPM: 50.6
Min nTPM: 22.3
P10809_1015
22.3
P10809_1030
25.3
P10809_1049
29.7
P10809_1068
23.7
P10809_1085
50.6
P10809_1112
24.9
Naive CD8 T-cell nTPM: 38.8
Samples: 6
Max nTPM: 55.0
Min nTPM: 30.9
P10809_1016
32.9
P10809_1031
35.0
P10809_1050
34.5
P10809_1069
44.7
P10809_1087
55.0
P10809_1110
30.9
T-reg nTPM: 28.8
Samples: 6
Max nTPM: 38.6
Min nTPM: 20.1
P10809_1018
38.6
P10809_1037
23.6
P10809_1056
37.4
P10809_1075
24.6
P10809_1094
28.6
P10809_1106
20.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.1
Samples: 4
Max nTPM: 123.2
Min nTPM: 74.2
RHH5202_R3573
123.2
RHH5230_R3602
114.1
RHH5259_R3631
74.2
RHH5288_R3660
112.8
Effector memory CD8 T-cell nTPM: 167.7
Samples: 4
Max nTPM: 203.1
Min nTPM: 99.0
RHH5203_R3574
203.1
RHH5231_R3603
196.7
RHH5260_R3632
172.0
RHH5289_R3661
99.0
MAIT T-cell nTPM: 108.5
Samples: 4
Max nTPM: 118.0
Min nTPM: 90.6
RHH5233_R3605
110.8
RHH5205_R3576
118.0
RHH5262_R3634
114.4
RHH5297_R3663
90.6
Memory CD4 T-cell TFH nTPM: 80.2
Samples: 4
Max nTPM: 99.0
Min nTPM: 69.1
RHH5300_R3666
69.1
RHH5236_R3608
75.8
RHH5265_R3637
76.7
RHH5208_R3579
99.0
Memory CD4 T-cell Th1 nTPM: 84.2
Samples: 4
Max nTPM: 90.8
Min nTPM: 76.7
RHH5210_R3581
88.6
RHH5302_R3668
80.8
RHH5238_R3610
76.7
RHH5267_R3639
90.8
Memory CD4 T-cell Th1/Th17 nTPM: 103.2
Samples: 4
Max nTPM: 116.5
Min nTPM: 70.3
RHH5303_R3669
114.7
RHH5211_R3582
116.5
RHH5239_R3611
70.3
RHH5268_R3640
111.4
Memory CD4 T-cell Th17 nTPM: 109.6
Samples: 4
Max nTPM: 119.5
Min nTPM: 100.9
RHH5304_R3670
100.9
RHH5212_R3583
104.4
RHH5240_R3612
113.5
RHH5269_R3641
119.5
Memory CD4 T-cell Th2 nTPM: 95.7
Samples: 4
Max nTPM: 103.6
Min nTPM: 91.3
RHH5305_R3671
91.3
RHH5213_R3584
95.3
RHH5241_R3613
92.6
RHH5270_R3642
103.6
Naive CD4 T-cell nTPM: 81.9
Samples: 4
Max nTPM: 90.8
Min nTPM: 69.4
RHH5306_R3672
80.1
RHH5214_R3585
90.8
RHH5242_R3614
69.4
RHH5271_R3643
87.2
Naive CD8 T-cell nTPM: 84.3
Samples: 4
Max nTPM: 99.4
Min nTPM: 53.6
RHH5201_R3572
90.8
RHH5229_R3601
53.6
RHH5258_R3630
99.4
RHH5287_R3659
93.4
Non-Vd2 gdTCR nTPM: 139.6
Samples: 4
Max nTPM: 184.4
Min nTPM: 112.7
RHH5235_R3607
123.6
RHH5264_R3636
184.4
RHH5207_R3578
137.5
RHH5299_R3665
112.7
T-reg nTPM: 72.1
Samples: 4
Max nTPM: 90.3
Min nTPM: 47.2
RHH5301_R3667
72.1
RHH5237_R3609
90.3
RHH5266_R3638
78.8
RHH5209_R3580
47.2
Terminal effector memory CD4 T-cell nTPM: 145.0
Samples: 2
Max nTPM: 156.2
Min nTPM: 133.7
RHH5243_R3615
133.7
RHH5272_R3644
156.2
Terminal effector memory CD8 T-cell nTPM: 140.1
Samples: 4
Max nTPM: 166.4
Min nTPM: 124.3
RHH5232_R3604
166.4
RHH5204_R3575
124.3
RHH5261_R3633
135.1
RHH5296_R3662
134.6
Vd2 gdTCR nTPM: 152.2
Samples: 4
Max nTPM: 179.3
Min nTPM: 117.2
RHH5234_R3606
150.7
RHH5206_R3577
179.3
RHH5263_R3635
161.5
RHH5298_R3664
117.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
