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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
19.5
nTPM
Monaco:
17.8
nTPM
Schmiedel:
87.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.5
HPA sample
nTPM
gdT-cell nTPM: 14.2
Samples: 6
Max nTPM: 21.0
Min nTPM: 9.8
P10809_1007
11.8
P10809_1022
14.6
P10809_1041
21.0
P10809_1060
12.9
P10809_1077
9.8
P10809_1098
15.1
MAIT T-cell nTPM: 16.8
Samples: 6
Max nTPM: 27.7
Min nTPM: 7.5
P10809_1006
17.4
P10809_1024
27.7
P10809_1043
13.2
P10809_1062
7.5
P10809_1083
10.5
P10809_1097
24.4
Memory CD4 T-cell nTPM: 12.0
Samples: 6
Max nTPM: 15.8
Min nTPM: 8.3
P10809_1014
8.3
P10809_1026
11.2
P10809_1045
15.8
P10809_1064
15.1
P10809_1086
10.6
P10809_1113
11.2
Memory CD8 T-cell nTPM: 14.6
Samples: 5
Max nTPM: 23.3
Min nTPM: 10.3
P10809_1012
10.3
P10809_1027
11.5
P10809_1046
23.3
P10809_1065
14.8
P10809_1111
13.0
Naive CD4 T-cell nTPM: 17.8
Samples: 6
Max nTPM: 22.0
Min nTPM: 9.9
P10809_1015
9.9
P10809_1030
17.0
P10809_1049
21.7
P10809_1068
16.4
P10809_1085
22.0
P10809_1112
20.0
Naive CD8 T-cell nTPM: 12.7
Samples: 6
Max nTPM: 14.7
Min nTPM: 9.4
P10809_1016
9.4
P10809_1031
10.6
P10809_1050
13.5
P10809_1069
14.7
P10809_1087
13.3
P10809_1110
14.7
T-reg nTPM: 19.5
Samples: 6
Max nTPM: 28.3
Min nTPM: 10.9
P10809_1018
11.2
P10809_1037
24.1
P10809_1056
18.5
P10809_1075
28.3
P10809_1094
24.1
P10809_1106
10.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 7.2
Samples: 4
Max nTPM: 13.7
Min nTPM: 1.6
RHH5202_R3573
6.3
RHH5230_R3602
1.6
RHH5259_R3631
13.7
RHH5288_R3660
7.1
Effector memory CD8 T-cell nTPM: 10.9
Samples: 4
Max nTPM: 14.6
Min nTPM: 6.5
RHH5203_R3574
11.2
RHH5231_R3603
14.6
RHH5260_R3632
11.4
RHH5289_R3661
6.5
MAIT T-cell nTPM: 8.7
Samples: 4
Max nTPM: 16.6
Min nTPM: 2.4
RHH5233_R3605
4.0
RHH5205_R3576
2.4
RHH5262_R3634
11.7
RHH5297_R3663
16.6
Memory CD4 T-cell TFH nTPM: 8.2
Samples: 4
Max nTPM: 22.0
Min nTPM: 0.0
RHH5300_R3666
0.0
RHH5236_R3608
22.0
RHH5265_R3637
5.2
RHH5208_R3579
5.6
Memory CD4 T-cell Th1 nTPM: 8.7
Samples: 4
Max nTPM: 14.4
Min nTPM: 5.6
RHH5210_R3581
7.0
RHH5302_R3668
14.4
RHH5238_R3610
7.9
RHH5267_R3639
5.6
Memory CD4 T-cell Th1/Th17 nTPM: 12.3
Samples: 4
Max nTPM: 17.8
Min nTPM: 4.3
RHH5303_R3669
17.8
RHH5211_R3582
17.4
RHH5239_R3611
4.3
RHH5268_R3640
9.7
Memory CD4 T-cell Th17 nTPM: 6.6
Samples: 4
Max nTPM: 16.7
Min nTPM: 0.5
RHH5304_R3670
7.8
RHH5212_R3583
16.7
RHH5240_R3612
0.5
RHH5269_R3641
1.4
Memory CD4 T-cell Th2 nTPM: 6.7
Samples: 4
Max nTPM: 14.2
Min nTPM: 0.0
RHH5305_R3671
14.2
RHH5213_R3584
7.4
RHH5241_R3613
0.0
RHH5270_R3642
5.2
Naive CD4 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 17.1
Min nTPM: 6.0
RHH5306_R3672
6.0
RHH5214_R3585
17.1
RHH5242_R3614
15.2
RHH5271_R3643
14.7
Naive CD8 T-cell nTPM: 9.3
Samples: 4
Max nTPM: 14.2
Min nTPM: 0.7
RHH5201_R3572
10.2
RHH5229_R3601
0.7
RHH5258_R3630
14.2
RHH5287_R3659
12.1
Non-Vd2 gdTCR nTPM: 12.6
Samples: 4
Max nTPM: 24.1
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
20.5
RHH5207_R3578
5.7
RHH5299_R3665
24.1
T-reg nTPM: 14.1
Samples: 4
Max nTPM: 25.3
Min nTPM: 5.1
RHH5301_R3667
25.3
RHH5237_R3609
14.4
RHH5266_R3638
5.1
RHH5209_R3580
11.7
Terminal effector memory CD4 T-cell nTPM: 12.3
Samples: 2
Max nTPM: 14.4
Min nTPM: 10.1
RHH5243_R3615
10.1
RHH5272_R3644
14.4
Terminal effector memory CD8 T-cell nTPM: 17.8
Samples: 4
Max nTPM: 41.1
Min nTPM: 7.2
RHH5232_R3604
7.2
RHH5204_R3575
41.1
RHH5261_R3633
10.3
RHH5296_R3662
12.6
Vd2 gdTCR nTPM: 10.7
Samples: 4
Max nTPM: 14.4
Min nTPM: 6.1
RHH5234_R3606
14.3
RHH5206_R3577
6.1
RHH5263_R3635
14.4
RHH5298_R3664
7.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
