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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
64.5
nTPM
Monaco:
181.7
nTPM
Schmiedel:
232.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.5
HPA sample
nTPM
gdT-cell nTPM: 64.5
Samples: 6
Max nTPM: 79.9
Min nTPM: 51.1
P10809_1007
79.9
P10809_1022
68.9
P10809_1041
57.3
P10809_1060
51.1
P10809_1077
63.0
P10809_1098
66.8
MAIT T-cell nTPM: 60.9
Samples: 6
Max nTPM: 68.1
Min nTPM: 54.4
P10809_1006
65.8
P10809_1024
54.4
P10809_1043
58.5
P10809_1062
55.8
P10809_1083
68.1
P10809_1097
62.8
Memory CD4 T-cell nTPM: 53.7
Samples: 6
Max nTPM: 62.4
Min nTPM: 45.3
P10809_1014
62.4
P10809_1026
54.8
P10809_1045
49.3
P10809_1064
45.3
P10809_1086
53.3
P10809_1113
57.3
Memory CD8 T-cell nTPM: 62.5
Samples: 5
Max nTPM: 76.7
Min nTPM: 50.7
P10809_1012
76.7
P10809_1027
62.2
P10809_1046
63.3
P10809_1065
50.7
P10809_1111
59.4
Naive CD4 T-cell nTPM: 34.6
Samples: 6
Max nTPM: 63.7
Min nTPM: 20.3
P10809_1015
32.8
P10809_1030
20.3
P10809_1049
21.9
P10809_1068
30.9
P10809_1085
63.7
P10809_1112
37.9
Naive CD8 T-cell nTPM: 42.2
Samples: 6
Max nTPM: 60.2
Min nTPM: 34.0
P10809_1016
37.6
P10809_1031
35.0
P10809_1050
39.0
P10809_1069
47.5
P10809_1087
60.2
P10809_1110
34.0
T-reg nTPM: 55.5
Samples: 6
Max nTPM: 100.2
Min nTPM: 39.3
P10809_1018
100.2
P10809_1037
40.0
P10809_1056
39.3
P10809_1075
40.1
P10809_1094
66.9
P10809_1106
46.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
181.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 132.0
Samples: 4
Max nTPM: 151.4
Min nTPM: 94.4
RHH5202_R3573
151.4
RHH5230_R3602
146.0
RHH5259_R3631
94.4
RHH5288_R3660
136.1
Effector memory CD8 T-cell nTPM: 169.8
Samples: 4
Max nTPM: 192.3
Min nTPM: 125.2
RHH5203_R3574
192.3
RHH5231_R3603
174.8
RHH5260_R3632
186.8
RHH5289_R3661
125.2
MAIT T-cell nTPM: 163.6
Samples: 4
Max nTPM: 186.4
Min nTPM: 147.0
RHH5233_R3605
147.0
RHH5205_R3576
186.4
RHH5262_R3634
165.5
RHH5297_R3663
155.5
Memory CD4 T-cell TFH nTPM: 134.7
Samples: 4
Max nTPM: 162.1
Min nTPM: 105.1
RHH5300_R3666
105.1
RHH5236_R3608
115.4
RHH5265_R3637
162.1
RHH5208_R3579
156.0
Memory CD4 T-cell Th1 nTPM: 111.9
Samples: 4
Max nTPM: 129.4
Min nTPM: 90.6
RHH5210_R3581
115.7
RHH5302_R3668
112.0
RHH5238_R3610
90.6
RHH5267_R3639
129.4
Memory CD4 T-cell Th1/Th17 nTPM: 145.4
Samples: 4
Max nTPM: 177.3
Min nTPM: 90.1
RHH5303_R3669
161.5
RHH5211_R3582
177.3
RHH5239_R3611
90.1
RHH5268_R3640
152.6
Memory CD4 T-cell Th17 nTPM: 157.9
Samples: 4
Max nTPM: 175.2
Min nTPM: 137.7
RHH5304_R3670
146.6
RHH5212_R3583
171.9
RHH5240_R3612
175.2
RHH5269_R3641
137.7
Memory CD4 T-cell Th2 nTPM: 143.8
Samples: 4
Max nTPM: 154.9
Min nTPM: 137.3
RHH5305_R3671
137.3
RHH5213_R3584
154.9
RHH5241_R3613
145.3
RHH5270_R3642
137.8
Naive CD4 T-cell nTPM: 83.5
Samples: 4
Max nTPM: 94.4
Min nTPM: 72.2
RHH5306_R3672
77.4
RHH5214_R3585
72.2
RHH5242_R3614
90.1
RHH5271_R3643
94.4
Naive CD8 T-cell nTPM: 72.1
Samples: 4
Max nTPM: 90.1
Min nTPM: 40.8
RHH5201_R3572
90.1
RHH5229_R3601
40.8
RHH5258_R3630
81.9
RHH5287_R3659
75.7
Non-Vd2 gdTCR nTPM: 181.7
Samples: 4
Max nTPM: 256.4
Min nTPM: 145.2
RHH5235_R3607
153.3
RHH5264_R3636
256.4
RHH5207_R3578
171.8
RHH5299_R3665
145.2
T-reg nTPM: 113.6
Samples: 4
Max nTPM: 133.1
Min nTPM: 102.6
RHH5301_R3667
107.5
RHH5237_R3609
102.6
RHH5266_R3638
133.1
RHH5209_R3580
111.2
Terminal effector memory CD4 T-cell nTPM: 140.6
Samples: 2
Max nTPM: 145.6
Min nTPM: 135.5
RHH5243_R3615
145.6
RHH5272_R3644
135.5
Terminal effector memory CD8 T-cell nTPM: 174.9
Samples: 4
Max nTPM: 190.1
Min nTPM: 155.2
RHH5232_R3604
189.3
RHH5204_R3575
155.2
RHH5261_R3633
190.1
RHH5296_R3662
164.9
Vd2 gdTCR nTPM: 164.0
Samples: 4
Max nTPM: 217.1
Min nTPM: 124.7
RHH5234_R3606
146.8
RHH5206_R3577
217.1
RHH5263_R3635
167.3
RHH5298_R3664
124.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
