We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
28.0
nTPM
Monaco:
118.2
nTPM
Schmiedel:
39.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.0
HPA sample
nTPM
gdT-cell nTPM: 23.0
Samples: 6
Max nTPM: 46.7
Min nTPM: 8.7
P10809_1007
8.7
P10809_1022
19.0
P10809_1041
17.5
P10809_1060
46.7
P10809_1077
20.9
P10809_1098
25.4
MAIT T-cell nTPM: 28.0
Samples: 6
Max nTPM: 45.2
Min nTPM: 13.5
P10809_1006
33.6
P10809_1024
26.0
P10809_1043
31.4
P10809_1062
45.2
P10809_1083
13.5
P10809_1097
18.2
Memory CD4 T-cell nTPM: 20.6
Samples: 6
Max nTPM: 28.5
Min nTPM: 13.7
P10809_1014
18.4
P10809_1026
20.8
P10809_1045
20.0
P10809_1064
28.5
P10809_1086
13.7
P10809_1113
22.0
Memory CD8 T-cell nTPM: 24.3
Samples: 5
Max nTPM: 29.8
Min nTPM: 15.4
P10809_1012
23.8
P10809_1027
29.8
P10809_1046
15.4
P10809_1065
28.6
P10809_1111
23.8
Naive CD4 T-cell nTPM: 8.2
Samples: 6
Max nTPM: 10.9
Min nTPM: 5.0
P10809_1015
5.0
P10809_1030
7.9
P10809_1049
7.1
P10809_1068
10.3
P10809_1085
10.9
P10809_1112
7.7
Naive CD8 T-cell nTPM: 10.2
Samples: 6
Max nTPM: 19.7
Min nTPM: 5.8
P10809_1016
5.8
P10809_1031
7.3
P10809_1050
6.1
P10809_1069
19.7
P10809_1087
13.0
P10809_1110
9.1
T-reg nTPM: 15.9
Samples: 6
Max nTPM: 24.8
Min nTPM: 8.8
P10809_1018
8.8
P10809_1037
24.8
P10809_1056
19.5
P10809_1075
20.0
P10809_1094
10.2
P10809_1106
12.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.2
Samples: 4
Max nTPM: 164.6
Min nTPM: 87.8
RHH5202_R3573
87.8
RHH5230_R3602
104.4
RHH5259_R3631
116.1
RHH5288_R3660
164.6
Effector memory CD8 T-cell nTPM: 101.6
Samples: 4
Max nTPM: 106.8
Min nTPM: 94.5
RHH5203_R3574
94.5
RHH5231_R3603
104.8
RHH5260_R3632
100.3
RHH5289_R3661
106.8
MAIT T-cell nTPM: 115.2
Samples: 4
Max nTPM: 126.3
Min nTPM: 106.4
RHH5233_R3605
118.1
RHH5205_R3576
126.3
RHH5262_R3634
106.4
RHH5297_R3663
110.1
Memory CD4 T-cell TFH nTPM: 56.1
Samples: 4
Max nTPM: 59.8
Min nTPM: 50.1
RHH5300_R3666
59.8
RHH5236_R3608
55.7
RHH5265_R3637
58.6
RHH5208_R3579
50.1
Memory CD4 T-cell Th1 nTPM: 106.4
Samples: 4
Max nTPM: 136.3
Min nTPM: 74.2
RHH5210_R3581
74.2
RHH5302_R3668
136.3
RHH5238_R3610
123.4
RHH5267_R3639
91.9
Memory CD4 T-cell Th1/Th17 nTPM: 111.8
Samples: 4
Max nTPM: 117.3
Min nTPM: 103.0
RHH5303_R3669
112.0
RHH5211_R3582
103.0
RHH5239_R3611
114.8
RHH5268_R3640
117.3
Memory CD4 T-cell Th17 nTPM: 114.6
Samples: 4
Max nTPM: 131.3
Min nTPM: 95.1
RHH5304_R3670
104.6
RHH5212_R3583
95.1
RHH5240_R3612
131.3
RHH5269_R3641
127.4
Memory CD4 T-cell Th2 nTPM: 111.8
Samples: 4
Max nTPM: 137.8
Min nTPM: 69.2
RHH5305_R3671
133.6
RHH5213_R3584
106.5
RHH5241_R3613
69.2
RHH5270_R3642
137.8
Naive CD4 T-cell nTPM: 51.3
Samples: 4
Max nTPM: 65.5
Min nTPM: 36.4
RHH5306_R3672
58.5
RHH5214_R3585
44.8
RHH5242_R3614
36.4
RHH5271_R3643
65.5
Naive CD8 T-cell nTPM: 41.3
Samples: 4
Max nTPM: 48.7
Min nTPM: 33.9
RHH5201_R3572
33.9
RHH5229_R3601
45.8
RHH5258_R3630
36.6
RHH5287_R3659
48.7
Non-Vd2 gdTCR nTPM: 79.8
Samples: 4
Max nTPM: 89.4
Min nTPM: 66.2
RHH5235_R3607
66.2
RHH5264_R3636
89.4
RHH5207_R3578
79.8
RHH5299_R3665
83.8
T-reg nTPM: 81.9
Samples: 4
Max nTPM: 103.7
Min nTPM: 59.3
RHH5301_R3667
103.7
RHH5237_R3609
71.8
RHH5266_R3638
92.6
RHH5209_R3580
59.3
Terminal effector memory CD4 T-cell nTPM: 22.7
Samples: 2
Max nTPM: 26.6
Min nTPM: 18.7
RHH5243_R3615
18.7
RHH5272_R3644
26.6
Terminal effector memory CD8 T-cell nTPM: 103.1
Samples: 4
Max nTPM: 199.5
Min nTPM: 44.4
RHH5232_R3604
100.2
RHH5204_R3575
44.4
RHH5261_R3633
199.5
RHH5296_R3662
68.1
Vd2 gdTCR nTPM: 80.5
Samples: 4
Max nTPM: 113.8
Min nTPM: 54.4
RHH5234_R3606
113.8
RHH5206_R3577
54.4
RHH5263_R3635
86.4
RHH5298_R3664
67.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
