HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.6 nTPM
HPA Brain:24.0 nTPM
GTEx:16.6 nTPM
FANTOM5:50.2 Scaled Tags Per Million
Pig:26.2 nTPM
Mouse:24.3 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.8
2148 Female, age 91, left hemisphere 29.0
2529 Female, age 94, left hemisphere 21.9
1911 Female, age 85, right hemisphere 21.4
2621 Female, age 67, right hemisphere 21.0
1898 Male, age 80, left hemisphere 20.5
1855 Male, age 76, left hemisphere 17.0
Dentate gyrus
nTPM: 23.3
2530 Female, age 94, left hemisphere 27.8
2010 Male, age 76, both hemispheres 25.8
2531 Female, age 67, both hemispheres 23.0
1927 Female, age 91, both hemispheres 22.6
2246 Female, age 85, both hemispheres 20.6
2528 Male, age 74, both hemispheres 20.1
Entorhinal gyrus
nTPM: 21.9
1787 Male, age 76, left hemisphere 24.5
2117 Female, age 91, right hemisphere 23.6
2613 Female, age 94, left hemisphere 22.5
2764 Male, age 80, right hemisphere 21.7
1938 Female, age 85, left hemisphere 19.7
2686 Male, age 75, right hemisphere 19.3
Hippocampus, CA1
nTPM: 22.5
2749 Male, age 80, left hemisphere 24.2
2527 Male, age 74, both hemispheres 23.2
2082 Female, age 91, right hemisphere 23.1
1873 Female, age 85, both hemispheres 21.1
2045 Male, age 76, both hemispheres 21.0
Hippocampus, CA2
nTPM: 23.1
2113 Female, age 91, right hemisphere 26.6
1892 Male, age 76, both hemispheres 24.8
1963 Male, age 80, left hemisphere 24.8
1940 Female, age 85, left hemisphere 22.3
2249 Male, age 74, both hemispheres 21.4
2437 Female, age 94, left hemisphere 18.5
Hippocampus, CA3
nTPM: 22.2
2620 Female, age 94, left hemisphere 26.3
1867 Male, age 76, both hemispheres 22.3
1891 Female, age 85, both hemispheres 22.0
2861 Female, age 67, both hemispheres 21.6
2137 Male, age 80, left hemisphere 20.7
2436 Male, age 74, both hemispheres 20.1
Parahippocampal cortex
nTPM: 24.0
2622 Female, age 67, right hemisphere 27.2
2018 Male, age 76, both hemispheres 26.8
1990 Female, age 91, right hemisphere 25.8
2250 Female, age 67, right hemisphere 25.4
2245 Female, age 91, both hemispheres 24.9
2692 Male, age 74, both hemispheres 24.6
2532 Female, age 72, left hemisphere 23.2
1933 Female, age 85, both hemispheres 22.6
1850 Male, age 80, both hemispheres 20.8
2693 Female, age 94, both hemispheres 19.0
Perirhinal gyrus
nTPM: 22.4
2521 Female, age 94, right hemisphere 24.6
2848 Male, age 76, right hemisphere 22.9
1841 Female, age 85, right hemisphere 22.2
1794 Male, age 80, right hemisphere 21.1
1847 Female, age 91, left hemisphere 21.0
Subiculum
nTPM: 19.6
2729 Female, age 91, right hemisphere 22.6
2042 Male, age 76, both hemispheres 21.3
2619 Male, age 74, both hemispheres 21.3
1977 Female, age 85, both hemispheres 20.9
1901 Male, age 80, both hemispheres 17.3
2438 Female, age 94, left hemisphere 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 33.3
Min nTPM: 6.3
Std nTPM: 4.6
Median nTPM: 15.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 28.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 28.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 27.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 27.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 26.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 26.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 26.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 25.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 25.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.2
FF:10153-102I9 76 years, female 53.8
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.5
Samples: 4

Max nTPM: 29.0
Min nTPM: 17.8
Sample A Female 29.0
Sample B Female 19.8
Sample C Male 23.3
Sample D Male 17.8
Dorsal hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 28.4
Min nTPM: 16.2
Sample A Female 28.4
Sample B Female 26.5
Sample C Male 22.4
Sample D Male 16.2
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 30.6
Min nTPM: 23.4
Sample A Female 25.2
Sample B Female 25.5
Sample C Male 30.6
Sample D Male 23.4
Ventral hippocampus
nTPM: 23.7
Samples: 4

Max nTPM: 29.4
Min nTPM: 17.7
Sample A Female 21.5
Sample B Female 17.7
Sample C Male 29.4
Sample D Male 26.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 25.7
Min nTPM: 22.5
Sample A Male 22.9
Sample B Male 25.7
Sample C Female 24.8
Sample D Female 22.5
Hippocampal formation
nTPM: 24.4
Samples: 4

Max nTPM: 25.2
Min nTPM: 23.0
Sample A Male 24.8
Sample B Male 24.4
Sample C Female 25.2
Sample D Female 23.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
583563 Antisense, RP_040831_02_F11, Mouse strain C57BL/6J (56 days, male) 11.3

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