HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:25.1 nTPM
HPA Brain:44.1 nTPM
GTEx:25.1 nTPM
FANTOM5:14.9 Scaled Tags Per Million
Mouse:34.0 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042139Antibody HPA058526
Glial cells MediumNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.1
Sample id Sample description nTPM
Hippocampus
nTPM: 39.1
1855 Male, age 76, left hemisphere 46.0
1898 Male, age 80, left hemisphere 42.4
2148 Female, age 91, left hemisphere 39.6
2621 Female, age 67, right hemisphere 37.2
1911 Female, age 85, right hemisphere 35.7
2529 Female, age 94, left hemisphere 33.5
Dentate gyrus
nTPM: 40.8
2010 Male, age 76, both hemispheres 48.0
1927 Female, age 91, both hemispheres 43.4
2530 Female, age 94, left hemisphere 43.2
2531 Female, age 67, both hemispheres 41.0
2528 Male, age 74, both hemispheres 35.5
2246 Female, age 85, both hemispheres 33.7
Entorhinal gyrus
nTPM: 35.4
2613 Female, age 94, left hemisphere 41.0
1787 Male, age 76, left hemisphere 38.7
2764 Male, age 80, right hemisphere 37.9
1938 Female, age 85, left hemisphere 34.7
2117 Female, age 91, right hemisphere 30.1
2686 Male, age 75, right hemisphere 29.9
Hippocampus, CA1
nTPM: 44.1
2749 Male, age 80, left hemisphere 59.1
2045 Male, age 76, both hemispheres 54.9
1873 Female, age 85, both hemispheres 42.1
2527 Male, age 74, both hemispheres 35.5
2082 Female, age 91, right hemisphere 29.0
Hippocampus, CA2
nTPM: 38.2
1892 Male, age 76, both hemispheres 50.6
1963 Male, age 80, left hemisphere 47.6
2437 Female, age 94, left hemisphere 36.6
2249 Male, age 74, both hemispheres 33.8
1940 Female, age 85, left hemisphere 30.6
2113 Female, age 91, right hemisphere 30.0
Hippocampus, CA3
nTPM: 41.6
2137 Male, age 80, left hemisphere 51.7
1867 Male, age 76, both hemispheres 47.9
2861 Female, age 67, both hemispheres 43.8
2620 Female, age 94, left hemisphere 42.1
2436 Male, age 74, both hemispheres 33.5
1891 Female, age 85, both hemispheres 30.3
Parahippocampal cortex
nTPM: 33.2
2245 Female, age 91, both hemispheres 35.4
2532 Female, age 72, left hemisphere 35.4
2018 Male, age 76, both hemispheres 35.0
2250 Female, age 67, right hemisphere 33.7
2622 Female, age 67, right hemisphere 33.2
1933 Female, age 85, both hemispheres 32.9
1990 Female, age 91, right hemisphere 32.2
2693 Female, age 94, both hemispheres 32.1
1850 Male, age 80, both hemispheres 31.2
2692 Male, age 74, both hemispheres 31.0
Perirhinal gyrus
nTPM: 35.7
1794 Male, age 80, right hemisphere 39.0
1847 Female, age 91, left hemisphere 36.8
2521 Female, age 94, right hemisphere 36.6
1841 Female, age 85, right hemisphere 36.1
2848 Male, age 76, right hemisphere 30.0
Subiculum
nTPM: 33.0
1901 Male, age 80, both hemispheres 36.7
2042 Male, age 76, both hemispheres 36.0
1977 Female, age 85, both hemispheres 35.1
2729 Female, age 91, right hemisphere 32.5
2619 Male, age 74, both hemispheres 30.5
2438 Female, age 94, left hemisphere 27.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.1
Samples: 197

Max nTPM: 52.8
Min nTPM: 9.1
Std nTPM: 7.6
Median nTPM: 24.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 52.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 48.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 47.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 46.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 45.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 44.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 42.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 41.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 40.9
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 40.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 39.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.9
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.6
Samples: 4

Max nTPM: 37.1
Min nTPM: 32.2
Sample A Male 32.2
Sample B Male 32.4
Sample C Female 32.6
Sample D Female 37.1
Hippocampal formation
nTPM: 34.1
Samples: 4

Max nTPM: 39.2
Min nTPM: 28.3
Sample A Male 28.3
Sample B Male 33.0
Sample C Female 39.2
Sample D Female 35.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
2619 Antisense, RP_040526_02_A01, Mouse strain C57BL/6J (56 days, male) 5.9
2620 Antisense, RP_040526_02_A01, Mouse strain C57BL/6J (56 days, male) 5.5

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