HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.7 nTPM
HPA Brain:38.6 nTPM
GTEx:15.7 nTPM
FANTOM5:25.5 Scaled Tags Per Million
Pig:4.7 nTPM
Mouse:29.7 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053240
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.6
Sample id Sample description nTPM
Hippocampus
nTPM: 20.5
2148 Female, age 91, left hemisphere 24.1
1911 Female, age 85, right hemisphere 23.9
2529 Female, age 94, left hemisphere 21.4
2621 Female, age 67, right hemisphere 19.7
1898 Male, age 80, left hemisphere 18.6
1855 Male, age 76, left hemisphere 15.3
Dentate gyrus
nTPM: 22.6
2246 Female, age 85, both hemispheres 34.5
2528 Male, age 74, both hemispheres 23.8
2530 Female, age 94, left hemisphere 22.5
2531 Female, age 67, both hemispheres 21.8
1927 Female, age 91, both hemispheres 17.6
2010 Male, age 76, both hemispheres 15.4
Entorhinal gyrus
nTPM: 38.6
2613 Female, age 94, left hemisphere 49.6
1787 Male, age 76, left hemisphere 42.4
1938 Female, age 85, left hemisphere 40.0
2764 Male, age 80, right hemisphere 39.9
2686 Male, age 75, right hemisphere 33.7
2117 Female, age 91, right hemisphere 26.1
Hippocampus, CA1
nTPM: 23.5
2082 Female, age 91, right hemisphere 43.5
2527 Male, age 74, both hemispheres 27.1
2045 Male, age 76, both hemispheres 16.5
1873 Female, age 85, both hemispheres 15.5
2749 Male, age 80, left hemisphere 15.0
Hippocampus, CA2
nTPM: 25.5
1940 Female, age 85, left hemisphere 37.1
2113 Female, age 91, right hemisphere 32.4
2437 Female, age 94, left hemisphere 27.0
2249 Male, age 74, both hemispheres 26.7
1892 Male, age 76, both hemispheres 18.4
1963 Male, age 80, left hemisphere 11.3
Hippocampus, CA3
nTPM: 23.4
1891 Female, age 85, both hemispheres 25.7
2620 Female, age 94, left hemisphere 24.4
2436 Male, age 74, both hemispheres 24.2
2861 Female, age 67, both hemispheres 23.3
1867 Male, age 76, both hemispheres 22.9
2137 Male, age 80, left hemisphere 20.0
Parahippocampal cortex
nTPM: 30.3
2692 Male, age 74, both hemispheres 38.0
2693 Female, age 94, both hemispheres 32.5
1990 Female, age 91, right hemisphere 32.3
2622 Female, age 67, right hemisphere 31.7
2018 Male, age 76, both hemispheres 31.2
1850 Male, age 80, both hemispheres 30.3
1933 Female, age 85, both hemispheres 27.8
2532 Female, age 72, left hemisphere 27.6
2250 Female, age 67, right hemisphere 27.4
2245 Female, age 91, both hemispheres 24.6
Perirhinal gyrus
nTPM: 28.5
2848 Male, age 76, right hemisphere 42.2
1847 Female, age 91, left hemisphere 31.5
1841 Female, age 85, right hemisphere 23.3
1794 Male, age 80, right hemisphere 22.9
2521 Female, age 94, right hemisphere 22.7
Subiculum
nTPM: 28.4
1977 Female, age 85, both hemispheres 37.0
2619 Male, age 74, both hemispheres 32.4
2438 Female, age 94, left hemisphere 29.5
2042 Male, age 76, both hemispheres 24.6
2729 Female, age 91, right hemisphere 23.8
1901 Male, age 80, both hemispheres 22.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.7
Samples: 197

Max nTPM: 46.1
Min nTPM: 3.3
Std nTPM: 7.6
Median nTPM: 13.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 46.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 41.5
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 39.7
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 35.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 35.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 34.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 34.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 33.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 32.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 32.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 32.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.5
FF:10153-102I9 76 years, female 26.1
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.7
Pig sample Sample description nTPM
Subiculum
nTPM: 4.3
Samples: 4

Max nTPM: 7.0
Min nTPM: 3.1
Sample A Female 7.0
Sample B Female 3.5
Sample C Male 3.7
Sample D Male 3.1
Dorsal hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.8
Sample A Female 5.0
Sample B Female 4.0
Sample C Male 3.8
Sample D Male 5.1
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 3.7
Min nTPM: 2.8
Sample A Female 3.5
Sample B Female 3.7
Sample C Male 2.8
Sample D Male 3.6
Ventral hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 5.6
Min nTPM: 3.7
Sample A Female 5.2
Sample B Female 3.7
Sample C Male 5.6
Sample D Male 4.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 38.7
Min nTPM: 19.1
Sample A Male 19.1
Sample B Male 23.0
Sample C Female 38.7
Sample D Female 37.9
Hippocampal formation
nTPM: 15.3
Samples: 4

Max nTPM: 20.7
Min nTPM: 7.4
Sample A Male 18.1
Sample B Male 14.8
Sample C Female 7.4
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
75651161 Antisense, RP_060518_01_A06, Mouse strain C57BL/6J (56 days, male) 3.5
68844403 Antisense, RP_050222_01_E09, Mouse strain C57BL/6J (56 days, male) 1.9

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