HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:20.7 nTPM
HPA Brain:42.5 nTPM
GTEx:20.7 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:20.3 nTPM
Mouse:108.5 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037142
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Hippocampus
nTPM: 37.2
2148 Female, age 91, left hemisphere 46.9
1855 Male, age 76, left hemisphere 38.0
2621 Female, age 67, right hemisphere 37.1
1898 Male, age 80, left hemisphere 35.2
1911 Female, age 85, right hemisphere 34.2
2529 Female, age 94, left hemisphere 31.5
Dentate gyrus
nTPM: 38.2
2531 Female, age 67, both hemispheres 53.1
1927 Female, age 91, both hemispheres 47.1
2246 Female, age 85, both hemispheres 41.9
2528 Male, age 74, both hemispheres 34.1
2010 Male, age 76, both hemispheres 28.4
2530 Female, age 94, left hemisphere 24.8
Entorhinal gyrus
nTPM: 40.8
1787 Male, age 76, left hemisphere 44.6
2686 Male, age 75, right hemisphere 42.8
2613 Female, age 94, left hemisphere 42.5
2764 Male, age 80, right hemisphere 42.1
1938 Female, age 85, left hemisphere 41.2
2117 Female, age 91, right hemisphere 31.8
Hippocampus, CA1
nTPM: 38.7
2045 Male, age 76, both hemispheres 44.3
2082 Female, age 91, right hemisphere 43.8
1873 Female, age 85, both hemispheres 37.2
2527 Male, age 74, both hemispheres 35.8
2749 Male, age 80, left hemisphere 32.5
Hippocampus, CA2
nTPM: 36.5
1940 Female, age 85, left hemisphere 44.0
2113 Female, age 91, right hemisphere 43.0
1892 Male, age 76, both hemispheres 36.5
2437 Female, age 94, left hemisphere 32.8
2249 Male, age 74, both hemispheres 32.6
1963 Male, age 80, left hemisphere 30.3
Hippocampus, CA3
nTPM: 42.5
2620 Female, age 94, left hemisphere 59.4
2137 Male, age 80, left hemisphere 44.5
1891 Female, age 85, both hemispheres 40.0
2861 Female, age 67, both hemispheres 39.5
2436 Male, age 74, both hemispheres 39.1
1867 Male, age 76, both hemispheres 32.5
Parahippocampal cortex
nTPM: 39.6
2693 Female, age 94, both hemispheres 54.0
2622 Female, age 67, right hemisphere 44.3
1850 Male, age 80, both hemispheres 40.5
2245 Female, age 91, both hemispheres 39.7
1990 Female, age 91, right hemisphere 39.4
2532 Female, age 72, left hemisphere 37.7
2250 Female, age 67, right hemisphere 37.4
1933 Female, age 85, both hemispheres 36.9
2692 Male, age 74, both hemispheres 33.9
2018 Male, age 76, both hemispheres 32.6
Perirhinal gyrus
nTPM: 42.2
2848 Male, age 76, right hemisphere 44.8
1794 Male, age 80, right hemisphere 43.3
1847 Female, age 91, left hemisphere 41.7
2521 Female, age 94, right hemisphere 40.8
1841 Female, age 85, right hemisphere 40.6
Subiculum
nTPM: 34.6
2619 Male, age 74, both hemispheres 39.2
2729 Female, age 91, right hemisphere 37.4
1977 Female, age 85, both hemispheres 37.1
1901 Male, age 80, both hemispheres 34.8
2438 Female, age 94, left hemisphere 33.7
2042 Male, age 76, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.7
Samples: 197

Max nTPM: 44.1
Min nTPM: 6.6
Std nTPM: 5.7
Median nTPM: 19.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 44.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 43.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 39.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 36.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 35.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 35.2
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 33.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 33.4
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 31.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 31.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 31.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.6
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.3
Pig sample Sample description nTPM
Subiculum
nTPM: 14.0
Samples: 4

Max nTPM: 17.2
Min nTPM: 11.9
Sample A Female 17.2
Sample B Female 13.1
Sample C Male 13.6
Sample D Male 11.9
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 17.7
Sample A Female 23.5
Sample B Female 18.4
Sample C Male 17.7
Sample D Male 21.4
Entorhinal cortex
nTPM: 16.4
Samples: 4

Max nTPM: 18.4
Min nTPM: 14.3
Sample A Female 18.2
Sample B Female 18.4
Sample C Male 14.3
Sample D Male 14.6
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.6
Sample A Female 17.2
Sample B Female 13.6
Sample C Male 19.6
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 108.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.5
Samples: 4

Max nTPM: 111.1
Min nTPM: 103.7
Sample A Male 108.2
Sample B Male 111.1
Sample C Female 111.0
Sample D Female 103.7
Hippocampal formation
nTPM: 103.4
Samples: 4

Max nTPM: 118.5
Min nTPM: 92.0
Sample A Male 118.5
Sample B Male 92.0
Sample C Female 103.6
Sample D Female 99.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
68117984 Antisense, RP_040929_01_H02, Mouse strain C57BL/6J (56 days, male) 1.8

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