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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
119.0
nTPM
Monaco:
70.4
nTPM
Schmiedel:
37.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
119.0
HPA sample
nTPM
gdT-cell nTPM: 116.2
Samples: 6
Max nTPM: 334.8
Min nTPM: 30.1
P10809_1007
334.8
P10809_1022
32.3
P10809_1041
54.6
P10809_1060
213.1
P10809_1077
30.1
P10809_1098
32.4
MAIT T-cell nTPM: 69.3
Samples: 6
Max nTPM: 181.4
Min nTPM: 15.5
P10809_1006
181.4
P10809_1024
16.9
P10809_1043
28.6
P10809_1062
150.4
P10809_1083
23.2
P10809_1097
15.5
Memory CD4 T-cell nTPM: 83.0
Samples: 6
Max nTPM: 212.0
Min nTPM: 17.5
P10809_1014
179.5
P10809_1026
38.9
P10809_1045
24.3
P10809_1064
212.0
P10809_1086
26.0
P10809_1113
17.5
Memory CD8 T-cell nTPM: 119.0
Samples: 5
Max nTPM: 262.5
Min nTPM: 27.0
P10809_1012
237.2
P10809_1027
37.5
P10809_1046
30.9
P10809_1065
262.5
P10809_1111
27.0
Naive CD4 T-cell nTPM: 78.2
Samples: 6
Max nTPM: 169.8
Min nTPM: 30.6
P10809_1015
157.6
P10809_1030
37.4
P10809_1049
33.9
P10809_1068
169.8
P10809_1085
30.6
P10809_1112
40.0
Naive CD8 T-cell nTPM: 109.5
Samples: 6
Max nTPM: 255.3
Min nTPM: 28.2
P10809_1016
216.3
P10809_1031
53.3
P10809_1050
46.0
P10809_1069
255.3
P10809_1087
28.2
P10809_1110
57.9
T-reg nTPM: 53.2
Samples: 6
Max nTPM: 124.4
Min nTPM: 14.5
P10809_1018
124.4
P10809_1037
15.9
P10809_1056
46.1
P10809_1075
103.0
P10809_1094
14.5
P10809_1106
15.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 21.8
Samples: 4
Max nTPM: 26.6
Min nTPM: 16.3
RHH5202_R3573
26.2
RHH5230_R3602
18.0
RHH5259_R3631
26.6
RHH5288_R3660
16.3
Effector memory CD8 T-cell nTPM: 18.2
Samples: 4
Max nTPM: 34.0
Min nTPM: 7.1
RHH5203_R3574
18.2
RHH5231_R3603
7.1
RHH5260_R3632
34.0
RHH5289_R3661
13.4
MAIT T-cell nTPM: 20.8
Samples: 4
Max nTPM: 33.0
Min nTPM: 14.3
RHH5233_R3605
16.0
RHH5205_R3576
33.0
RHH5262_R3634
19.8
RHH5297_R3663
14.3
Memory CD4 T-cell TFH nTPM: 28.0
Samples: 4
Max nTPM: 69.1
Min nTPM: 8.9
RHH5300_R3666
8.9
RHH5236_R3608
69.1
RHH5265_R3637
20.5
RHH5208_R3579
13.6
Memory CD4 T-cell Th1 nTPM: 46.0
Samples: 4
Max nTPM: 67.3
Min nTPM: 29.5
RHH5210_R3581
29.5
RHH5302_R3668
40.1
RHH5238_R3610
67.3
RHH5267_R3639
47.0
Memory CD4 T-cell Th1/Th17 nTPM: 41.7
Samples: 4
Max nTPM: 49.8
Min nTPM: 27.6
RHH5303_R3669
27.6
RHH5211_R3582
49.8
RHH5239_R3611
46.8
RHH5268_R3640
42.4
Memory CD4 T-cell Th17 nTPM: 37.2
Samples: 4
Max nTPM: 51.1
Min nTPM: 26.5
RHH5304_R3670
26.5
RHH5212_R3583
51.1
RHH5240_R3612
36.1
RHH5269_R3641
35.1
Memory CD4 T-cell Th2 nTPM: 30.9
Samples: 4
Max nTPM: 41.3
Min nTPM: 23.9
RHH5305_R3671
23.9
RHH5213_R3584
41.3
RHH5241_R3613
33.2
RHH5270_R3642
25.2
Naive CD4 T-cell nTPM: 36.5
Samples: 4
Max nTPM: 72.2
Min nTPM: 19.7
RHH5306_R3672
19.7
RHH5214_R3585
72.2
RHH5242_R3614
30.0
RHH5271_R3643
24.2
Naive CD8 T-cell nTPM: 31.6
Samples: 4
Max nTPM: 49.1
Min nTPM: 21.8
RHH5201_R3572
29.5
RHH5229_R3601
49.1
RHH5258_R3630
21.8
RHH5287_R3659
26.1
Non-Vd2 gdTCR nTPM: 47.3
Samples: 4
Max nTPM: 62.6
Min nTPM: 34.1
RHH5235_R3607
34.1
RHH5264_R3636
62.6
RHH5207_R3578
40.5
RHH5299_R3665
51.9
T-reg nTPM: 33.4
Samples: 4
Max nTPM: 37.6
Min nTPM: 25.6
RHH5301_R3667
37.6
RHH5237_R3609
34.4
RHH5266_R3638
35.8
RHH5209_R3580
25.6
Terminal effector memory CD4 T-cell nTPM: 26.7
Samples: 2
Max nTPM: 34.7
Min nTPM: 18.6
RHH5243_R3615
34.7
RHH5272_R3644
18.6
Terminal effector memory CD8 T-cell nTPM: 49.1
Samples: 4
Max nTPM: 83.3
Min nTPM: 9.8
RHH5232_R3604
9.8
RHH5204_R3575
83.3
RHH5261_R3633
71.3
RHH5296_R3662
32.1
Vd2 gdTCR nTPM: 70.5
Samples: 4
Max nTPM: 172.7
Min nTPM: 20.3
RHH5234_R3606
20.3
RHH5206_R3577
172.7
RHH5263_R3635
57.0
RHH5298_R3664
31.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
