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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
70.1
nTPM
Monaco:
27.8
nTPM
Schmiedel:
107.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.1
HPA sample
nTPM
gdT-cell nTPM: 41.8
Samples: 6
Max nTPM: 47.8
Min nTPM: 29.6
P10809_1007
29.6
P10809_1022
47.8
P10809_1041
47.7
P10809_1060
47.6
P10809_1077
37.1
P10809_1098
40.8
MAIT T-cell nTPM: 45.3
Samples: 6
Max nTPM: 63.8
Min nTPM: 24.7
P10809_1006
24.7
P10809_1024
41.2
P10809_1043
63.2
P10809_1062
63.8
P10809_1083
26.1
P10809_1097
52.7
Memory CD4 T-cell nTPM: 50.6
Samples: 6
Max nTPM: 64.1
Min nTPM: 34.0
P10809_1014
34.0
P10809_1026
57.0
P10809_1045
64.1
P10809_1064
50.7
P10809_1086
42.0
P10809_1113
55.8
Memory CD8 T-cell nTPM: 43.2
Samples: 5
Max nTPM: 56.1
Min nTPM: 32.8
P10809_1012
32.8
P10809_1027
39.2
P10809_1046
56.1
P10809_1065
43.3
P10809_1111
44.5
Naive CD4 T-cell nTPM: 70.1
Samples: 6
Max nTPM: 95.2
Min nTPM: 40.4
P10809_1015
40.4
P10809_1030
63.6
P10809_1049
95.2
P10809_1068
71.4
P10809_1085
72.8
P10809_1112
77.2
Naive CD8 T-cell nTPM: 54.8
Samples: 6
Max nTPM: 65.6
Min nTPM: 31.4
P10809_1016
45.5
P10809_1031
64.4
P10809_1050
65.6
P10809_1069
63.1
P10809_1087
31.4
P10809_1110
58.9
T-reg nTPM: 69.6
Samples: 6
Max nTPM: 84.6
Min nTPM: 54.7
P10809_1018
54.7
P10809_1037
66.2
P10809_1056
83.9
P10809_1075
61.4
P10809_1094
84.6
P10809_1106
66.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 21.2
Samples: 4
Max nTPM: 26.1
Min nTPM: 15.0
RHH5202_R3573
15.0
RHH5230_R3602
19.3
RHH5259_R3631
26.1
RHH5288_R3660
24.3
Effector memory CD8 T-cell nTPM: 27.6
Samples: 4
Max nTPM: 35.3
Min nTPM: 19.9
RHH5203_R3574
32.8
RHH5231_R3603
19.9
RHH5260_R3632
35.3
RHH5289_R3661
22.4
MAIT T-cell nTPM: 25.0
Samples: 4
Max nTPM: 31.1
Min nTPM: 19.2
RHH5233_R3605
20.8
RHH5205_R3576
31.1
RHH5262_R3634
28.7
RHH5297_R3663
19.2
Memory CD4 T-cell TFH nTPM: 20.3
Samples: 4
Max nTPM: 26.6
Min nTPM: 11.2
RHH5300_R3666
24.7
RHH5236_R3608
18.5
RHH5265_R3637
11.2
RHH5208_R3579
26.6
Memory CD4 T-cell Th1 nTPM: 20.8
Samples: 4
Max nTPM: 28.4
Min nTPM: 6.1
RHH5210_R3581
6.1
RHH5302_R3668
21.1
RHH5238_R3610
28.4
RHH5267_R3639
27.4
Memory CD4 T-cell Th1/Th17 nTPM: 25.4
Samples: 4
Max nTPM: 33.0
Min nTPM: 22.8
RHH5303_R3669
22.8
RHH5211_R3582
33.0
RHH5239_R3611
23.0
RHH5268_R3640
22.9
Memory CD4 T-cell Th17 nTPM: 27.0
Samples: 4
Max nTPM: 42.1
Min nTPM: 11.2
RHH5304_R3670
11.2
RHH5212_R3583
35.5
RHH5240_R3612
42.1
RHH5269_R3641
19.0
Memory CD4 T-cell Th2 nTPM: 22.6
Samples: 4
Max nTPM: 35.4
Min nTPM: 15.8
RHH5305_R3671
15.8
RHH5213_R3584
19.4
RHH5241_R3613
19.6
RHH5270_R3642
35.4
Naive CD4 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 27.6
Min nTPM: 13.8
RHH5306_R3672
27.6
RHH5214_R3585
18.1
RHH5242_R3614
13.8
RHH5271_R3643
18.4
Naive CD8 T-cell nTPM: 27.8
Samples: 4
Max nTPM: 36.2
Min nTPM: 18.3
RHH5201_R3572
18.3
RHH5229_R3601
36.2
RHH5258_R3630
25.3
RHH5287_R3659
31.3
Non-Vd2 gdTCR nTPM: 23.9
Samples: 4
Max nTPM: 35.1
Min nTPM: 12.7
RHH5235_R3607
35.1
RHH5264_R3636
28.9
RHH5207_R3578
18.8
RHH5299_R3665
12.7
T-reg nTPM: 19.5
Samples: 4
Max nTPM: 28.5
Min nTPM: 11.2
RHH5301_R3667
11.2
RHH5237_R3609
28.5
RHH5266_R3638
24.9
RHH5209_R3580
13.4
Terminal effector memory CD4 T-cell nTPM: 21.3
Samples: 2
Max nTPM: 22.6
Min nTPM: 20.0
RHH5243_R3615
20.0
RHH5272_R3644
22.6
Terminal effector memory CD8 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 27.3
Min nTPM: 12.6
RHH5232_R3604
19.8
RHH5204_R3575
21.1
RHH5261_R3633
12.6
RHH5296_R3662
27.3
Vd2 gdTCR nTPM: 27.7
Samples: 4
Max nTPM: 46.2
Min nTPM: 15.8
RHH5234_R3606
15.8
RHH5206_R3577
46.2
RHH5263_R3635
28.2
RHH5298_R3664
20.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
