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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.7
nTPM
Monaco:
332.1
nTPM
Schmiedel:
186.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.7
HPA sample
nTPM
gdT-cell nTPM: 56.7
Samples: 6
Max nTPM: 68.3
Min nTPM: 48.5
P10809_1007
55.7
P10809_1022
59.1
P10809_1041
59.2
P10809_1060
68.3
P10809_1077
49.3
P10809_1098
48.5
MAIT T-cell nTPM: 44.6
Samples: 6
Max nTPM: 52.6
Min nTPM: 34.0
P10809_1006
52.6
P10809_1024
39.6
P10809_1043
40.7
P10809_1062
50.9
P10809_1083
34.0
P10809_1097
49.5
Memory CD4 T-cell nTPM: 22.4
Samples: 6
Max nTPM: 26.3
Min nTPM: 14.5
P10809_1014
25.0
P10809_1026
14.5
P10809_1045
21.4
P10809_1064
26.3
P10809_1086
25.7
P10809_1113
21.2
Memory CD8 T-cell nTPM: 39.7
Samples: 5
Max nTPM: 46.7
Min nTPM: 29.1
P10809_1012
46.7
P10809_1027
44.9
P10809_1046
38.5
P10809_1065
39.1
P10809_1111
29.1
Naive CD4 T-cell nTPM: 1.6
Samples: 6
Max nTPM: 5.8
Min nTPM: 0.3
P10809_1015
1.0
P10809_1030
0.5
P10809_1049
0.7
P10809_1068
1.5
P10809_1085
5.8
P10809_1112
0.3
Naive CD8 T-cell nTPM: 17.1
Samples: 6
Max nTPM: 30.6
Min nTPM: 3.7
P10809_1016
3.7
P10809_1031
18.5
P10809_1050
18.8
P10809_1069
23.7
P10809_1087
30.6
P10809_1110
7.3
T-reg nTPM: 34.2
Samples: 6
Max nTPM: 53.4
Min nTPM: 21.1
P10809_1018
42.3
P10809_1037
40.2
P10809_1056
21.1
P10809_1075
22.8
P10809_1094
53.4
P10809_1106
25.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
332.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 117.8
Samples: 4
Max nTPM: 148.4
Min nTPM: 91.7
RHH5202_R3573
91.7
RHH5230_R3602
122.3
RHH5259_R3631
148.4
RHH5288_R3660
108.9
Effector memory CD8 T-cell nTPM: 292.5
Samples: 4
Max nTPM: 303.5
Min nTPM: 283.1
RHH5203_R3574
284.1
RHH5231_R3603
283.1
RHH5260_R3632
303.5
RHH5289_R3661
299.4
MAIT T-cell nTPM: 233.2
Samples: 4
Max nTPM: 251.7
Min nTPM: 211.4
RHH5233_R3605
251.7
RHH5205_R3576
247.8
RHH5262_R3634
211.4
RHH5297_R3663
221.8
Memory CD4 T-cell TFH nTPM: 82.2
Samples: 4
Max nTPM: 86.4
Min nTPM: 75.2
RHH5300_R3666
81.1
RHH5236_R3608
75.2
RHH5265_R3637
86.4
RHH5208_R3579
86.2
Memory CD4 T-cell Th1 nTPM: 114.8
Samples: 4
Max nTPM: 180.2
Min nTPM: 75.9
RHH5210_R3581
75.9
RHH5302_R3668
104.8
RHH5238_R3610
180.2
RHH5267_R3639
98.4
Memory CD4 T-cell Th1/Th17 nTPM: 174.5
Samples: 4
Max nTPM: 186.8
Min nTPM: 149.4
RHH5303_R3669
186.8
RHH5211_R3582
179.3
RHH5239_R3611
182.5
RHH5268_R3640
149.4
Memory CD4 T-cell Th17 nTPM: 174.9
Samples: 4
Max nTPM: 209.0
Min nTPM: 142.7
RHH5304_R3670
184.5
RHH5212_R3583
163.3
RHH5240_R3612
209.0
RHH5269_R3641
142.7
Memory CD4 T-cell Th2 nTPM: 90.5
Samples: 4
Max nTPM: 107.1
Min nTPM: 77.1
RHH5305_R3671
90.4
RHH5213_R3584
87.5
RHH5241_R3613
77.1
RHH5270_R3642
107.1
Naive CD4 T-cell nTPM: 8.9
Samples: 4
Max nTPM: 14.5
Min nTPM: 6.5
RHH5306_R3672
7.1
RHH5214_R3585
7.3
RHH5242_R3614
14.5
RHH5271_R3643
6.5
Naive CD8 T-cell nTPM: 6.2
Samples: 4
Max nTPM: 15.0
Min nTPM: 2.7
RHH5201_R3572
4.0
RHH5229_R3601
15.0
RHH5258_R3630
3.2
RHH5287_R3659
2.7
Non-Vd2 gdTCR nTPM: 302.6
Samples: 4
Max nTPM: 351.5
Min nTPM: 253.0
RHH5235_R3607
351.5
RHH5264_R3636
313.3
RHH5207_R3578
292.5
RHH5299_R3665
253.0
T-reg nTPM: 87.3
Samples: 4
Max nTPM: 103.3
Min nTPM: 79.1
RHH5301_R3667
80.1
RHH5237_R3609
103.3
RHH5266_R3638
86.5
RHH5209_R3580
79.1
Terminal effector memory CD4 T-cell nTPM: 332.1
Samples: 2
Max nTPM: 388.9
Min nTPM: 275.3
RHH5243_R3615
388.9
RHH5272_R3644
275.3
Terminal effector memory CD8 T-cell nTPM: 289.8
Samples: 4
Max nTPM: 349.0
Min nTPM: 232.5
RHH5232_R3604
311.7
RHH5204_R3575
232.5
RHH5261_R3633
349.0
RHH5296_R3662
265.8
Vd2 gdTCR nTPM: 219.8
Samples: 4
Max nTPM: 259.0
Min nTPM: 172.4
RHH5234_R3606
201.6
RHH5206_R3577
259.0
RHH5263_R3635
246.3
RHH5298_R3664
172.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
