HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:11.8 nTPM
HPA Brain:34.0 nTPM
GTEx:11.8 nTPM
FANTOM5:9.4 Scaled Tags Per Million
Pig:7.5 nTPM
Mouse:4.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA021987
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Hippocampus
nTPM: 25.1
2148 Female, age 91, left hemisphere 58.4
2621 Female, age 67, right hemisphere 28.3
1911 Female, age 85, right hemisphere 20.8
1855 Male, age 76, left hemisphere 20.1
1898 Male, age 80, left hemisphere 16.7
2529 Female, age 94, left hemisphere 6.5
Dentate gyrus
nTPM: 34.0
1927 Female, age 91, both hemispheres 56.9
2531 Female, age 67, both hemispheres 47.7
2528 Male, age 74, both hemispheres 31.8
2010 Male, age 76, both hemispheres 28.1
2246 Female, age 85, both hemispheres 21.0
2530 Female, age 94, left hemisphere 18.4
Entorhinal gyrus
nTPM: 5.3
2764 Male, age 80, right hemisphere 6.1
1787 Male, age 76, left hemisphere 5.8
2117 Female, age 91, right hemisphere 5.6
2686 Male, age 75, right hemisphere 4.9
1938 Female, age 85, left hemisphere 4.7
2613 Female, age 94, left hemisphere 4.3
Hippocampus, CA1
nTPM: 30.6
2045 Male, age 76, both hemispheres 59.6
1873 Female, age 85, both hemispheres 41.3
2749 Male, age 80, left hemisphere 32.1
2527 Male, age 74, both hemispheres 14.2
2082 Female, age 91, right hemisphere 5.9
Hippocampus, CA2
nTPM: 16.5
1892 Male, age 76, both hemispheres 33.3
1963 Male, age 80, left hemisphere 29.9
2249 Male, age 74, both hemispheres 11.0
2437 Female, age 94, left hemisphere 8.6
1940 Female, age 85, left hemisphere 8.5
2113 Female, age 91, right hemisphere 7.6
Hippocampus, CA3
nTPM: 29.5
2620 Female, age 94, left hemisphere 50.1
2861 Female, age 67, both hemispheres 40.5
1867 Male, age 76, both hemispheres 27.0
1891 Female, age 85, both hemispheres 22.7
2137 Male, age 80, left hemisphere 22.7
2436 Male, age 74, both hemispheres 14.1
Parahippocampal cortex
nTPM: 5.3
1990 Female, age 91, right hemisphere 7.5
2692 Male, age 74, both hemispheres 6.2
2250 Female, age 67, right hemisphere 5.5
2018 Male, age 76, both hemispheres 5.4
2245 Female, age 91, both hemispheres 5.4
2622 Female, age 67, right hemisphere 5.2
2693 Female, age 94, both hemispheres 4.8
2532 Female, age 72, left hemisphere 4.7
1850 Male, age 80, both hemispheres 4.4
1933 Female, age 85, both hemispheres 3.5
Perirhinal gyrus
nTPM: 4.6
2848 Male, age 76, right hemisphere 5.5
1794 Male, age 80, right hemisphere 4.8
2521 Female, age 94, right hemisphere 4.8
1841 Female, age 85, right hemisphere 4.3
1847 Female, age 91, left hemisphere 3.5
Subiculum
nTPM: 9.7
2729 Female, age 91, right hemisphere 26.2
1901 Male, age 80, both hemispheres 9.1
2042 Male, age 76, both hemispheres 8.2
2619 Male, age 74, both hemispheres 6.1
1977 Female, age 85, both hemispheres 5.1
2438 Female, age 94, left hemisphere 3.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 75.5
Min nTPM: 0.6
Std nTPM: 14.9
Median nTPM: 4.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 75.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 66.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 63.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 58.1
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 54.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 52.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 51.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 47.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 46.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 45.3
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 43.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.4
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 2.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.5
Pig sample Sample description nTPM
Subiculum
nTPM: 7.5
Samples: 4

Max nTPM: 8.7
Min nTPM: 5.0
Sample A Female 8.7
Sample B Female 5.0
Sample C Male 7.7
Sample D Male 8.6
Dorsal hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.8
Sample A Female 3.8
Sample B Female 3.8
Sample C Male 4.5
Sample D Male 4.9
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 8.2
Min nTPM: 4.4
Sample A Female 7.4
Sample B Female 4.4
Sample C Male 8.2
Sample D Male 6.9
Ventral hippocampus
nTPM: 4.7
Samples: 4

Max nTPM: 6.3
Min nTPM: 3.2
Sample A Female 3.8
Sample B Female 3.2
Sample C Male 6.3
Sample D Male 5.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.0
Samples: 4

Max nTPM: 4.6
Min nTPM: 2.9
Sample A Male 2.9
Sample B Male 4.3
Sample C Female 4.6
Sample D Female 4.3
Hippocampal formation
nTPM: 0.8
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.6
Sample A Male 1.1
Sample B Male 0.6
Sample C Female 0.6
Sample D Female 0.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68445012 Antisense, RP_050111_02_F01, Mouse strain C57BL/6J (56 days, male) 0.1

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