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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
427.7
nTPM
FANTOM5:
86.2
Scaled Tags Per Million
Pig:
7.8
nTPM
Allen mouse:
14.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
427.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 407.9
2090
Male, age 80, both hemispheres
454.8
2188
Female, age 91, both hemispheres
411.1
2301
Female, age 85, both hemispheres
385.6
1984
Male, age 76, both hemispheres
380.2
Dorsal cochlear nucleus nTPM: 427.7
2802
Male, age 74, right hemisphere
529.7
2378
Male, age 80, both hemispheres
457.0
2187
Female, age 91, both hemispheres
403.4
2370
Male, age 61, both hemispheres
383.9
2058
Male, age 76, both hemispheres
364.3
Dorsal tegmental nucleus nTPM: 396.6
2326
Male, age 74, both hemispheres
425.0
2083
Male, age 80, both hemispheres
416.6
2358
Male, age 61, both hemispheres
410.0
1936
Male, age 76, left hemisphere
334.6
Dorsolateral tegmental area nTPM: 402.4
2337
Male, age 61, both hemispheres
523.0
2654
Male, age 80, both hemispheres
449.5
2360
Male, age 74, both hemispheres
378.7
2751
Female, age 85, both hemispheres
373.1
2141
Male, age 76, both hemispheres
287.8
Kolliker-Fuse nucleus nTPM: 413.3
2315
Male, age 76, right hemisphere
505.9
2793
Female, age 91, left hemisphere
388.9
2163
Male, age 80, both hemispheres
344.9
Lateral lemniscal nuclei nTPM: 305.7
2746
Female, age 85, left hemisphere
351.7
2320
Female, age 91, left hemisphere
322.1
2169
Male, age 76, both hemispheres
312.0
2453
Male, age 74, right hemisphere
275.9
2036
Male, age 80, both hemispheres
267.0
Lateral parabrachial nucleus nTPM: 421.0
2792
Male, age 76, both hemispheres
488.3
2013
Male, age 80, both hemispheres
459.3
2139
Female, age 85, right hemisphere
368.4
2790
Male, age 61, both hemispheres
367.9
Lateral vestibular nucleus nTPM: 382.1
2311
Male, age 80, both hemispheres
472.9
2184
Male, age 76, both hemispheres
291.3
Locus coeruleus nTPM: 310.0
2720
Male, age 74, both hemispheres
386.1
2317
Female, age 72, unknown
330.5
2123
Female, age 91, both hemispheres
328.4
2162
Male, age 80, both hemispheres
327.4
1980
Male, age 76, both hemispheres
287.7
2014
Male, age 55, unknown
285.8
2788
Male, age 74, unknown
223.9
Medial parabrachial nucleus nTPM: 365.5
2170
Female, age 91, both hemispheres
435.9
2463
Female, age 85, right hemisphere
401.0
2854
Male, age 80, both hemispheres
364.5
2786
Male, age 76, both hemispheres
325.0
2156
Male, age 61, both hemispheres
300.9
Medial periolivary nuclei nTPM: 335.3
2063
Male, age 76, both hemispheres
400.1
2081
Male, age 80, both hemispheres
367.2
2458
Female, age 91, both hemispheres
333.3
2791
Male, age 74, right hemisphere
317.7
2171
Female, age 85, both hemispheres
258.2
Motor facial nucleus nTPM: 337.7
2795
Female, age 91, both hemispheres
425.3
2062
Male, age 76, both hemispheres
358.2
2126
Male, age 61, both hemispheres
347.0
2697
Female, age 85, both hemispheres
329.8
2365
Male, age 74, right hemisphere
327.6
2327
Male, age 80, both hemispheres
238.2
Motor trigeminal nucleus nTPM: 343.6
2560
Male, age 74, both hemispheres
372.9
2309
Male, age 76, both hemispheres
355.8
2335
Male, age 61, both hemispheres
353.7
2321
Female, age 91, both hemispheres
347.8
2079
Male, age 80, both hemispheres
287.9
Nuclei of the trapezoid body nTPM: 330.1
1983
Male, age 76, both hemispheres
429.5
2368
Female, age 91, both hemispheres
333.4
2166
Male, age 80, both hemispheres
325.7
2735
Female, age 85, both hemispheres
289.9
2159
Male, age 61, both hemispheres
272.3
Nucleus raphe magnus nTPM: 314.0
2051
Male, age 76, both hemispheres
387.3
2459
Female, age 91, both hemispheres
353.5
2328
Male, age 80, both hemispheres
302.2
2160
Male, age 61, both hemispheres
292.9
2455
Male, age 74, both hemispheres
279.0
2172
Female, age 85, both hemispheres
268.8
Paramedian reticular nucleus nTPM: 341.3
2057
Male, age 80, both hemispheres
380.5
2313
Male, age 61, both hemispheres
334.3
2052
Male, age 76, both hemispheres
332.1
2050
Female, age 85, both hemispheres
318.4
Pedunculopontine tegmental nucleus nTPM: 368.6
2338
Male, age 61, both hemispheres
412.8
2334
Male, age 80, both hemispheres
394.0
1921
Female, age 85, both hemispheres
299.0
Pontine nuclei nTPM: 345.0
2319
Female, age 91, both hemispheres
393.3
1968
Male, age 76, left hemisphere
382.6
1863
Male, age 55, unknown
357.5
2787
Female, age 85, both hemispheres
348.4
2109
Female, age 72, unknown
327.7
2115
Male, age 80, left hemisphere
325.9
2454
Male, age 74, left hemisphere
315.1
2727
Male, age 61, right hemisphere
309.4
Pontine raphe nucleus nTPM: 333.3
2853
Male, age 76, midline
348.7
2122
Female, age 85, midline
318.0
Posteroventral cochlear nucleus nTPM: 419.8
2371
Male, age 61, both hemispheres
527.1
2341
Male, age 80, both hemispheres
451.3
2135
Female, age 91, both hemispheres
404.7
2070
Male, age 76, both hemispheres
364.7
2752
Female, age 85, both hemispheres
351.4
Principal sensory trigeminal nucleus nTPM: 305.8
2367
Female, age 91, left hemisphere
325.4
2158
Male, age 61, both hemispheres
316.8
2324
Male, age 76, both hemispheres
316.1
2008
Male, age 80, left hemisphere
265.0
Reticular pontine nucleus, caudal nTPM: 337.8
2559
Male, age 74, both hemispheres
394.8
2092
Male, age 76, both hemispheres
391.9
2457
Female, age 91, both hemispheres
322.1
2332
Male, age 80, right hemisphere
242.3
Reticular pontine nucleus, oral nTPM: 338.3
1939
Male, age 80, both hemispheres
373.9
2167
Male, age 76, both hemispheres
369.3
2366
Female, age 91, both hemispheres
363.7
2012
Female, age 85, both hemispheres
312.4
2361
Male, age 74, both hemispheres
272.0
Reticulotegmental nucleus nTPM: 342.1
2452
Male, age 74, both hemispheres
408.4
2322
Female, age 91, both hemispheres
346.2
2333
Male, age 80, both hemispheres
315.9
2325
Male, age 76, both hemispheres
297.8
Spinal trigeminal nucleus, oral nTPM: 336.4
1978
Male, age 76, both hemispheres
361.7
2164
Male, age 80, both hemispheres
344.5
2737
Female, age 85, both hemispheres
303.1
Subcoeruleus area nTPM: 355.6
2451
Male, age 74, both hemispheres
481.8
2369
Female, age 85, left hemisphere
391.1
1958
Male, age 80, both hemispheres
330.3
2323
Female, age 91, left hemisphere
293.6
2089
Male, age 76, left hemisphere
281.2
Superior olive nTPM: 327.9
2020
Male, age 76, both hemispheres
404.5
2561
Female, age 91, both hemispheres
364.9
2364
Male, age 74, right hemisphere
310.2
2329
Male, age 80, right hemisphere
285.0
1875
Female, age 85, both hemispheres
275.0
Ventral periolivary nuclei nTPM: 331.5
2023
Male, age 76, both hemispheres
397.9
2794
Female, age 91, left hemisphere
344.1
2165
Male, age 80, both hemispheres
297.0
2130
Female, age 85, both hemispheres
287.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 349.9
2359
Male, age 61, both hemispheres
396.4
2456
Female, age 91, both hemispheres
387.2
2161
Male, age 80, both hemispheres
374.4
1959
Male, age 76, both hemispheres
341.0
2840
Female, age 85, both hemispheres
313.6
2449
Male, age 74, both hemispheres
287.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
7.8
Pig sample
Sample description
nTPM
Pons nTPM: 7.8
Samples: 4
Max nTPM: 9.7
Min nTPM: 6.3
Sample A
Female
7.8
Sample B
Female
6.3
Sample C
Male
9.7
Sample D
Male
7.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
