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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
7318.5
nTPM
Monaco:
3104.2
nTPM
Schmiedel:
3250.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
7318.5
HPA sample
nTPM
gdT-cell nTPM: 3682.6
Samples: 6
Max nTPM: 4527.4
Min nTPM: 2851.1
P10809_1007
4269.3
P10809_1022
3479.7
P10809_1041
4527.4
P10809_1060
2851.1
P10809_1077
3095.4
P10809_1098
3872.6
MAIT T-cell nTPM: 5396.4
Samples: 6
Max nTPM: 6067.9
Min nTPM: 4635.1
P10809_1006
5540.9
P10809_1024
5451.5
P10809_1043
5432.9
P10809_1062
5250.0
P10809_1083
4635.1
P10809_1097
6067.9
Memory CD4 T-cell nTPM: 6270.2
Samples: 6
Max nTPM: 7779.7
Min nTPM: 4565.5
P10809_1014
7167.1
P10809_1026
7779.7
P10809_1045
6875.4
P10809_1064
5081.6
P10809_1086
4565.5
P10809_1113
6151.6
Memory CD8 T-cell nTPM: 5035.9
Samples: 5
Max nTPM: 6193.3
Min nTPM: 4301.2
P10809_1012
6193.3
P10809_1027
4884.4
P10809_1046
5154.0
P10809_1065
4301.2
P10809_1111
4646.7
Naive CD4 T-cell nTPM: 7318.5
Samples: 6
Max nTPM: 8741.9
Min nTPM: 5972.4
P10809_1015
7612.0
P10809_1030
8004.3
P10809_1049
8741.9
P10809_1068
7127.8
P10809_1085
5972.4
P10809_1112
6452.4
Naive CD8 T-cell nTPM: 5950.4
Samples: 6
Max nTPM: 8604.9
Min nTPM: 3431.9
P10809_1016
8604.9
P10809_1031
6414.1
P10809_1050
5831.4
P10809_1069
5564.8
P10809_1087
3431.9
P10809_1110
5855.2
T-reg nTPM: 5069.3
Samples: 6
Max nTPM: 6498.7
Min nTPM: 4162.1
P10809_1018
4760.8
P10809_1037
4162.1
P10809_1056
6498.7
P10809_1075
4727.4
P10809_1094
5487.1
P10809_1106
4779.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3104.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2463.2
Samples: 4
Max nTPM: 3282.6
Min nTPM: 1816.0
RHH5202_R3573
2440.7
RHH5230_R3602
2313.3
RHH5259_R3631
1816.0
RHH5288_R3660
3282.6
Effector memory CD8 T-cell nTPM: 1464.9
Samples: 4
Max nTPM: 1864.4
Min nTPM: 1202.0
RHH5203_R3574
1532.8
RHH5231_R3603
1864.4
RHH5260_R3632
1260.5
RHH5289_R3661
1202.0
MAIT T-cell nTPM: 2158.2
Samples: 4
Max nTPM: 3219.7
Min nTPM: 1296.6
RHH5233_R3605
2193.4
RHH5205_R3576
1296.6
RHH5262_R3634
1923.0
RHH5297_R3663
3219.7
Memory CD4 T-cell TFH nTPM: 3088.4
Samples: 4
Max nTPM: 4065.2
Min nTPM: 2410.1
RHH5300_R3666
3271.4
RHH5236_R3608
4065.2
RHH5265_R3637
2410.1
RHH5208_R3579
2606.9
Memory CD4 T-cell Th1 nTPM: 2836.7
Samples: 4
Max nTPM: 4118.2
Min nTPM: 1924.4
RHH5210_R3581
2577.7
RHH5302_R3668
4118.2
RHH5238_R3610
2726.5
RHH5267_R3639
1924.4
Memory CD4 T-cell Th1/Th17 nTPM: 2795.2
Samples: 4
Max nTPM: 4144.0
Min nTPM: 1733.7
RHH5303_R3669
4144.0
RHH5211_R3582
3265.6
RHH5239_R3611
1733.7
RHH5268_R3640
2037.4
Memory CD4 T-cell Th17 nTPM: 2192.6
Samples: 4
Max nTPM: 2891.3
Min nTPM: 1583.9
RHH5304_R3670
2544.5
RHH5212_R3583
2891.3
RHH5240_R3612
1750.7
RHH5269_R3641
1583.9
Memory CD4 T-cell Th2 nTPM: 2983.5
Samples: 4
Max nTPM: 3755.7
Min nTPM: 2111.6
RHH5305_R3671
3352.1
RHH5213_R3584
2714.7
RHH5241_R3613
3755.7
RHH5270_R3642
2111.6
Naive CD4 T-cell nTPM: 3104.2
Samples: 4
Max nTPM: 4155.4
Min nTPM: 2019.2
RHH5306_R3672
3573.5
RHH5214_R3585
4155.4
RHH5242_R3614
2668.6
RHH5271_R3643
2019.2
Naive CD8 T-cell nTPM: 2579.2
Samples: 4
Max nTPM: 3040.8
Min nTPM: 1912.1
RHH5201_R3572
2769.2
RHH5229_R3601
1912.1
RHH5258_R3630
3040.8
RHH5287_R3659
2594.8
Non-Vd2 gdTCR nTPM: 1359.1
Samples: 4
Max nTPM: 1850.5
Min nTPM: 1030.5
RHH5235_R3607
1125.4
RHH5264_R3636
1429.8
RHH5207_R3578
1030.5
RHH5299_R3665
1850.5
T-reg nTPM: 2511.1
Samples: 4
Max nTPM: 3359.7
Min nTPM: 1673.9
RHH5301_R3667
3359.7
RHH5237_R3609
3031.0
RHH5266_R3638
1673.9
RHH5209_R3580
1979.9
Terminal effector memory CD4 T-cell nTPM: 1683.1
Samples: 2
Max nTPM: 2161.5
Min nTPM: 1204.7
RHH5243_R3615
1204.7
RHH5272_R3644
2161.5
Terminal effector memory CD8 T-cell nTPM: 1695.5
Samples: 4
Max nTPM: 2107.7
Min nTPM: 1133.6
RHH5232_R3604
1631.1
RHH5204_R3575
2107.7
RHH5261_R3633
1133.6
RHH5296_R3662
1909.5
Vd2 gdTCR nTPM: 2372.5
Samples: 4
Max nTPM: 3211.6
Min nTPM: 1563.2
RHH5234_R3606
2098.1
RHH5206_R3577
2616.9
RHH5263_R3635
1563.2
RHH5298_R3664
3211.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.