HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:139.9 nTPM
HPA Brain:168.3 nTPM
GTEx:139.9 nTPM
FANTOM5:259.2 Scaled Tags Per Million
Pig:324.0 nTPM
Mouse:321.2 nTPM
Allen mouse:9.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030848
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 168.3
Sample id Sample description nTPM
Hippocampus
nTPM: 168.3
1855 Male, age 76, left hemisphere 223.3
1898 Male, age 80, left hemisphere 186.3
2621 Female, age 67, right hemisphere 174.3
2529 Female, age 94, left hemisphere 150.0
2148 Female, age 91, left hemisphere 141.1
1911 Female, age 85, right hemisphere 135.0
Dentate gyrus
nTPM: 161.8
2010 Male, age 76, both hemispheres 204.3
2530 Female, age 94, left hemisphere 188.3
2246 Female, age 85, both hemispheres 179.0
1927 Female, age 91, both hemispheres 157.7
2528 Male, age 74, both hemispheres 137.7
2531 Female, age 67, both hemispheres 104.0
Entorhinal gyrus
nTPM: 136.4
1938 Female, age 85, left hemisphere 164.3
2764 Male, age 80, right hemisphere 152.8
2117 Female, age 91, right hemisphere 149.2
2613 Female, age 94, left hemisphere 124.5
1787 Male, age 76, left hemisphere 119.2
2686 Male, age 75, right hemisphere 108.1
Hippocampus, CA1
nTPM: 165.8
2749 Male, age 80, left hemisphere 239.7
1873 Female, age 85, both hemispheres 165.3
2082 Female, age 91, right hemisphere 145.7
2045 Male, age 76, both hemispheres 139.5
2527 Male, age 74, both hemispheres 139.0
Hippocampus, CA2
nTPM: 164.1
1892 Male, age 76, both hemispheres 215.2
1963 Male, age 80, left hemisphere 186.3
2249 Male, age 74, both hemispheres 164.7
1940 Female, age 85, left hemisphere 148.0
2437 Female, age 94, left hemisphere 140.4
2113 Female, age 91, right hemisphere 130.0
Hippocampus, CA3
nTPM: 148.0
2137 Male, age 80, left hemisphere 188.5
1867 Male, age 76, both hemispheres 186.6
2436 Male, age 74, both hemispheres 140.6
2861 Female, age 67, both hemispheres 132.5
1891 Female, age 85, both hemispheres 124.3
2620 Female, age 94, left hemisphere 115.4
Parahippocampal cortex
nTPM: 148.5
2245 Female, age 91, both hemispheres 189.2
2532 Female, age 72, left hemisphere 177.1
2250 Female, age 67, right hemisphere 160.8
1850 Male, age 80, both hemispheres 158.4
2018 Male, age 76, both hemispheres 157.8
1933 Female, age 85, both hemispheres 154.4
2622 Female, age 67, right hemisphere 126.2
1990 Female, age 91, right hemisphere 123.2
2692 Male, age 74, both hemispheres 121.3
2693 Female, age 94, both hemispheres 116.9
Perirhinal gyrus
nTPM: 147.5
2521 Female, age 94, right hemisphere 185.0
1847 Female, age 91, left hemisphere 167.5
1794 Male, age 80, right hemisphere 144.8
1841 Female, age 85, right hemisphere 127.6
2848 Male, age 76, right hemisphere 112.4
Subiculum
nTPM: 150.2
2438 Female, age 94, left hemisphere 180.5
1901 Male, age 80, both hemispheres 174.3
2042 Male, age 76, both hemispheres 164.5
1977 Female, age 85, both hemispheres 143.4
2619 Male, age 74, both hemispheres 125.9
2729 Female, age 91, right hemisphere 112.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 139.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 139.9
Samples: 197

Max nTPM: 290.3
Min nTPM: 67.4
Std nTPM: 44.9
Median nTPM: 128.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 290.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 286.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 255.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 250.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 248.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 243.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 233.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 232.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 231.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 223.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 222.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 259.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 259.2
FF:10169-103B7 60 years, female 300.1
FF:10153-102I9 76 years, female 218.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 324.0
Pig sample Sample description nTPM
Subiculum
nTPM: 230.0
Samples: 4

Max nTPM: 297.4
Min nTPM: 202.5
Sample A Female 297.4
Sample B Female 202.5
Sample C Male 209.7
Sample D Male 210.2
Dorsal hippocampus
nTPM: 324.0
Samples: 4

Max nTPM: 476.3
Min nTPM: 214.0
Sample A Female 476.3
Sample B Female 214.0
Sample C Male 375.9
Sample D Male 229.7
Entorhinal cortex
nTPM: 195.2
Samples: 4

Max nTPM: 205.1
Min nTPM: 187.2
Sample A Female 205.1
Sample B Female 192.6
Sample C Male 195.7
Sample D Male 187.2
Ventral hippocampus
nTPM: 247.6
Samples: 4

Max nTPM: 297.6
Min nTPM: 157.9
Sample A Female 253.6
Sample B Female 157.9
Sample C Male 297.6
Sample D Male 281.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 321.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 248.3
Samples: 4

Max nTPM: 263.3
Min nTPM: 233.5
Sample A Male 241.0
Sample B Male 233.5
Sample C Female 263.3
Sample D Female 255.4
Hippocampal formation
nTPM: 321.2
Samples: 4

Max nTPM: 372.0
Min nTPM: 295.7
Sample A Male 309.3
Sample B Male 307.7
Sample C Female 372.0
Sample D Female 295.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.4
69873708 Antisense, RP_050512_01_G10, Mouse strain C57BL/6J (56 days, male) 9.4

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