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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3390.0
nTPM
Monaco:
670.9
nTPM
Schmiedel:
5008.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3390.0
HPA sample
nTPM
gdT-cell nTPM: 1272.9
Samples: 6
Max nTPM: 1598.7
Min nTPM: 1081.6
P10809_1007
1598.7
P10809_1022
1081.6
P10809_1041
1283.2
P10809_1060
1085.2
P10809_1077
1298.3
P10809_1098
1290.6
MAIT T-cell nTPM: 2189.3
Samples: 6
Max nTPM: 2483.5
Min nTPM: 1898.7
P10809_1006
2092.4
P10809_1024
2428.7
P10809_1043
1898.7
P10809_1062
2296.4
P10809_1083
1936.1
P10809_1097
2483.5
Memory CD4 T-cell nTPM: 2601.2
Samples: 6
Max nTPM: 3211.3
Min nTPM: 1823.9
P10809_1014
3211.3
P10809_1026
2956.2
P10809_1045
2885.9
P10809_1064
2197.3
P10809_1086
1823.9
P10809_1113
2532.3
Memory CD8 T-cell nTPM: 1880.8
Samples: 5
Max nTPM: 2081.2
Min nTPM: 1662.8
P10809_1012
2081.2
P10809_1027
1839.1
P10809_1046
1918.1
P10809_1065
1662.8
P10809_1111
1902.9
Naive CD4 T-cell nTPM: 3390.0
Samples: 6
Max nTPM: 4135.8
Min nTPM: 2421.8
P10809_1015
4135.8
P10809_1030
3725.8
P10809_1049
3607.3
P10809_1068
3439.1
P10809_1085
2421.8
P10809_1112
3010.3
Naive CD8 T-cell nTPM: 2583.5
Samples: 6
Max nTPM: 4343.9
Min nTPM: 1346.3
P10809_1016
4343.9
P10809_1031
2685.8
P10809_1050
2484.2
P10809_1069
2130.0
P10809_1087
1346.3
P10809_1110
2510.6
T-reg nTPM: 2098.1
Samples: 6
Max nTPM: 2208.7
Min nTPM: 1974.8
P10809_1018
2043.2
P10809_1037
2208.7
P10809_1056
2158.9
P10809_1075
2136.9
P10809_1094
1974.8
P10809_1106
2066.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
670.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 422.8
Samples: 4
Max nTPM: 574.2
Min nTPM: 236.1
RHH5202_R3573
236.1
RHH5230_R3602
474.0
RHH5259_R3631
574.2
RHH5288_R3660
406.7
Effector memory CD8 T-cell nTPM: 142.9
Samples: 4
Max nTPM: 267.4
Min nTPM: 69.4
RHH5203_R3574
101.5
RHH5231_R3603
133.3
RHH5260_R3632
267.4
RHH5289_R3661
69.4
MAIT T-cell nTPM: 318.8
Samples: 4
Max nTPM: 367.1
Min nTPM: 250.0
RHH5233_R3605
250.0
RHH5205_R3576
307.7
RHH5262_R3634
350.5
RHH5297_R3663
367.1
Memory CD4 T-cell TFH nTPM: 370.5
Samples: 4
Max nTPM: 507.6
Min nTPM: 242.0
RHH5300_R3666
404.5
RHH5236_R3608
507.6
RHH5265_R3637
327.9
RHH5208_R3579
242.0
Memory CD4 T-cell Th1 nTPM: 630.6
Samples: 4
Max nTPM: 981.2
Min nTPM: 265.6
RHH5210_R3581
265.6
RHH5302_R3668
739.8
RHH5238_R3610
981.2
RHH5267_R3639
535.8
Memory CD4 T-cell Th1/Th17 nTPM: 447.8
Samples: 4
Max nTPM: 578.3
Min nTPM: 287.9
RHH5303_R3669
381.7
RHH5211_R3582
287.9
RHH5239_R3611
543.4
RHH5268_R3640
578.3
Memory CD4 T-cell Th17 nTPM: 436.5
Samples: 4
Max nTPM: 607.9
Min nTPM: 317.8
RHH5304_R3670
607.9
RHH5212_R3583
317.8
RHH5240_R3612
410.6
RHH5269_R3641
409.8
Memory CD4 T-cell Th2 nTPM: 493.4
Samples: 4
Max nTPM: 668.8
Min nTPM: 390.2
RHH5305_R3671
668.8
RHH5213_R3584
390.2
RHH5241_R3613
499.4
RHH5270_R3642
415.0
Naive CD4 T-cell nTPM: 670.9
Samples: 4
Max nTPM: 778.7
Min nTPM: 555.1
RHH5306_R3672
778.7
RHH5214_R3585
748.4
RHH5242_R3614
555.1
RHH5271_R3643
601.5
Naive CD8 T-cell nTPM: 551.9
Samples: 4
Max nTPM: 721.2
Min nTPM: 326.5
RHH5201_R3572
326.5
RHH5229_R3601
721.2
RHH5258_R3630
466.7
RHH5287_R3659
693.0
Non-Vd2 gdTCR nTPM: 206.6
Samples: 4
Max nTPM: 278.1
Min nTPM: 130.5
RHH5235_R3607
272.0
RHH5264_R3636
145.9
RHH5207_R3578
130.5
RHH5299_R3665
278.1
T-reg nTPM: 475.8
Samples: 4
Max nTPM: 644.6
Min nTPM: 308.8
RHH5301_R3667
644.6
RHH5237_R3609
308.8
RHH5266_R3638
473.6
RHH5209_R3580
476.0
Terminal effector memory CD4 T-cell nTPM: 243.0
Samples: 2
Max nTPM: 264.7
Min nTPM: 221.3
RHH5243_R3615
264.7
RHH5272_R3644
221.3
Terminal effector memory CD8 T-cell nTPM: 262.8
Samples: 4
Max nTPM: 488.0
Min nTPM: 108.6
RHH5232_R3604
108.6
RHH5204_R3575
488.0
RHH5261_R3633
285.6
RHH5296_R3662
169.1
Vd2 gdTCR nTPM: 409.2
Samples: 4
Max nTPM: 535.5
Min nTPM: 272.4
RHH5234_R3606
272.4
RHH5206_R3577
535.5
RHH5263_R3635
294.2
RHH5298_R3664
534.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.