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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.1
nTPM
Monaco:
236.0
nTPM
Schmiedel:
172.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.1
HPA sample
nTPM
gdT-cell nTPM: 65.1
Samples: 6
Max nTPM: 72.3
Min nTPM: 57.4
P10809_1007
65.0
P10809_1022
72.3
P10809_1041
69.0
P10809_1060
57.4
P10809_1077
67.0
P10809_1098
60.1
MAIT T-cell nTPM: 58.5
Samples: 6
Max nTPM: 67.5
Min nTPM: 53.9
P10809_1006
61.9
P10809_1024
53.9
P10809_1043
67.5
P10809_1062
54.3
P10809_1083
57.7
P10809_1097
55.6
Memory CD4 T-cell nTPM: 51.7
Samples: 6
Max nTPM: 65.5
Min nTPM: 42.7
P10809_1014
52.2
P10809_1026
65.5
P10809_1045
51.0
P10809_1064
46.1
P10809_1086
42.7
P10809_1113
52.4
Memory CD8 T-cell nTPM: 53.1
Samples: 5
Max nTPM: 62.7
Min nTPM: 42.5
P10809_1012
62.7
P10809_1027
54.4
P10809_1046
59.0
P10809_1065
42.5
P10809_1111
47.1
Naive CD4 T-cell nTPM: 30.7
Samples: 6
Max nTPM: 37.4
Min nTPM: 22.7
P10809_1015
30.3
P10809_1030
37.4
P10809_1049
22.7
P10809_1068
29.6
P10809_1085
29.4
P10809_1112
34.7
Naive CD8 T-cell nTPM: 37.4
Samples: 6
Max nTPM: 46.5
Min nTPM: 28.9
P10809_1016
37.1
P10809_1031
43.3
P10809_1050
36.5
P10809_1069
28.9
P10809_1087
46.5
P10809_1110
32.0
T-reg nTPM: 63.5
Samples: 6
Max nTPM: 82.6
Min nTPM: 47.5
P10809_1018
76.8
P10809_1037
65.8
P10809_1056
51.9
P10809_1075
47.5
P10809_1094
82.6
P10809_1106
56.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 164.7
Samples: 4
Max nTPM: 241.5
Min nTPM: 130.2
RHH5202_R3573
140.5
RHH5230_R3602
241.5
RHH5259_R3631
130.2
RHH5288_R3660
146.5
Effector memory CD8 T-cell nTPM: 188.9
Samples: 4
Max nTPM: 251.0
Min nTPM: 153.6
RHH5203_R3574
164.0
RHH5231_R3603
251.0
RHH5260_R3632
187.0
RHH5289_R3661
153.6
MAIT T-cell nTPM: 226.0
Samples: 4
Max nTPM: 271.9
Min nTPM: 191.1
RHH5233_R3605
191.1
RHH5205_R3576
271.9
RHH5262_R3634
230.9
RHH5297_R3663
210.2
Memory CD4 T-cell TFH nTPM: 154.6
Samples: 4
Max nTPM: 207.0
Min nTPM: 102.1
RHH5300_R3666
207.0
RHH5236_R3608
160.1
RHH5265_R3637
149.1
RHH5208_R3579
102.1
Memory CD4 T-cell Th1 nTPM: 180.1
Samples: 4
Max nTPM: 202.5
Min nTPM: 164.8
RHH5210_R3581
183.5
RHH5302_R3668
202.5
RHH5238_R3610
169.4
RHH5267_R3639
164.8
Memory CD4 T-cell Th1/Th17 nTPM: 187.2
Samples: 4
Max nTPM: 228.6
Min nTPM: 153.6
RHH5303_R3669
153.6
RHH5211_R3582
228.6
RHH5239_R3611
176.6
RHH5268_R3640
190.1
Memory CD4 T-cell Th17 nTPM: 236.0
Samples: 4
Max nTPM: 246.4
Min nTPM: 219.9
RHH5304_R3670
246.4
RHH5212_R3583
246.0
RHH5240_R3612
231.6
RHH5269_R3641
219.9
Memory CD4 T-cell Th2 nTPM: 196.9
Samples: 4
Max nTPM: 259.4
Min nTPM: 157.5
RHH5305_R3671
259.4
RHH5213_R3584
180.7
RHH5241_R3613
157.5
RHH5270_R3642
189.9
Naive CD4 T-cell nTPM: 139.5
Samples: 4
Max nTPM: 162.0
Min nTPM: 126.7
RHH5306_R3672
162.0
RHH5214_R3585
126.7
RHH5242_R3614
137.9
RHH5271_R3643
131.3
Naive CD8 T-cell nTPM: 92.0
Samples: 4
Max nTPM: 115.1
Min nTPM: 54.4
RHH5201_R3572
54.4
RHH5229_R3601
115.1
RHH5258_R3630
100.0
RHH5287_R3659
98.4
Non-Vd2 gdTCR nTPM: 217.1
Samples: 4
Max nTPM: 289.8
Min nTPM: 180.7
RHH5235_R3607
289.8
RHH5264_R3636
180.7
RHH5207_R3578
202.6
RHH5299_R3665
195.3
T-reg nTPM: 163.0
Samples: 4
Max nTPM: 169.2
Min nTPM: 154.6
RHH5301_R3667
169.2
RHH5237_R3609
154.6
RHH5266_R3638
159.4
RHH5209_R3580
168.6
Terminal effector memory CD4 T-cell nTPM: 219.7
Samples: 2
Max nTPM: 249.4
Min nTPM: 189.9
RHH5243_R3615
249.4
RHH5272_R3644
189.9
Terminal effector memory CD8 T-cell nTPM: 200.1
Samples: 4
Max nTPM: 233.6
Min nTPM: 182.8
RHH5232_R3604
233.6
RHH5204_R3575
198.3
RHH5261_R3633
185.9
RHH5296_R3662
182.8
Vd2 gdTCR nTPM: 197.8
Samples: 4
Max nTPM: 223.7
Min nTPM: 171.1
RHH5234_R3606
223.7
RHH5206_R3577
212.1
RHH5263_R3635
184.2
RHH5298_R3664
171.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
