HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:25.1 nTPM
HPA Brain:48.3 nTPM
GTEx:25.1 nTPM
FANTOM5:40.5 Scaled Tags Per Million
Pig:32.8 nTPM
Mouse:31.0 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028177Antibody HPA028180Antibody HPA028182
Glial cells Not detectedNot detectedMedium
Neuronal cells Not detectedNot detectedHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.3
Sample id Sample description nTPM
Hippocampus
nTPM: 47.6
2621 Female, age 67, right hemisphere 60.5
2529 Female, age 94, left hemisphere 46.9
1898 Male, age 80, left hemisphere 46.4
2148 Female, age 91, left hemisphere 45.6
1911 Female, age 85, right hemisphere 43.5
1855 Male, age 76, left hemisphere 42.8
Dentate gyrus
nTPM: 43.5
2531 Female, age 67, both hemispheres 52.2
2530 Female, age 94, left hemisphere 48.6
2246 Female, age 85, both hemispheres 42.1
1927 Female, age 91, both hemispheres 41.6
2528 Male, age 74, both hemispheres 40.5
2010 Male, age 76, both hemispheres 36.3
Entorhinal gyrus
nTPM: 48.3
2613 Female, age 94, left hemisphere 57.1
2686 Male, age 75, right hemisphere 50.7
2764 Male, age 80, right hemisphere 49.7
2117 Female, age 91, right hemisphere 44.7
1938 Female, age 85, left hemisphere 44.0
1787 Male, age 76, left hemisphere 43.8
Hippocampus, CA1
nTPM: 41.9
2749 Male, age 80, left hemisphere 48.5
2527 Male, age 74, both hemispheres 45.7
2082 Female, age 91, right hemisphere 44.5
1873 Female, age 85, both hemispheres 41.0
2045 Male, age 76, both hemispheres 29.7
Hippocampus, CA2
nTPM: 43.0
1963 Male, age 80, left hemisphere 49.2
2113 Female, age 91, right hemisphere 45.6
1892 Male, age 76, both hemispheres 43.1
2437 Female, age 94, left hemisphere 42.8
1940 Female, age 85, left hemisphere 39.2
2249 Male, age 74, both hemispheres 38.1
Hippocampus, CA3
nTPM: 47.2
2861 Female, age 67, both hemispheres 70.6
2137 Male, age 80, left hemisphere 51.7
2620 Female, age 94, left hemisphere 50.2
2436 Male, age 74, both hemispheres 37.1
1867 Male, age 76, both hemispheres 36.9
1891 Female, age 85, both hemispheres 36.6
Parahippocampal cortex
nTPM: 45.5
2245 Female, age 91, both hemispheres 56.0
2622 Female, age 67, right hemisphere 52.6
2692 Male, age 74, both hemispheres 47.7
1933 Female, age 85, both hemispheres 44.4
2250 Female, age 67, right hemisphere 44.0
2532 Female, age 72, left hemisphere 44.0
1850 Male, age 80, both hemispheres 43.3
1990 Female, age 91, right hemisphere 43.0
2693 Female, age 94, both hemispheres 42.4
2018 Male, age 76, both hemispheres 37.4
Perirhinal gyrus
nTPM: 43.9
2521 Female, age 94, right hemisphere 49.9
1794 Male, age 80, right hemisphere 46.0
1847 Female, age 91, left hemisphere 44.3
2848 Male, age 76, right hemisphere 40.0
1841 Female, age 85, right hemisphere 39.4
Subiculum
nTPM: 39.7
2619 Male, age 74, both hemispheres 43.3
1901 Male, age 80, both hemispheres 41.8
2042 Male, age 76, both hemispheres 41.8
1977 Female, age 85, both hemispheres 39.7
2438 Female, age 94, left hemisphere 38.7
2729 Female, age 91, right hemisphere 33.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.1
Samples: 197

Max nTPM: 61.7
Min nTPM: 8.2
Std nTPM: 7.6
Median nTPM: 24.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 61.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 55.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 46.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 44.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 43.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 43.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 43.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 42.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 42.4
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 42.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 39.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.5
FF:10153-102I9 76 years, female 52.9
FF:10169-103B7 60 years, female 28.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.8
Pig sample Sample description nTPM
Subiculum
nTPM: 29.6
Samples: 4

Max nTPM: 31.5
Min nTPM: 26.7
Sample A Female 31.5
Sample B Female 29.5
Sample C Male 30.7
Sample D Male 26.7
Dorsal hippocampus
nTPM: 31.0
Samples: 4

Max nTPM: 33.8
Min nTPM: 26.4
Sample A Female 32.7
Sample B Female 33.8
Sample C Male 31.2
Sample D Male 26.4
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 32.1
Min nTPM: 26.7
Sample A Female 27.3
Sample B Female 26.7
Sample C Male 32.1
Sample D Male 28.3
Ventral hippocampus
nTPM: 32.8
Samples: 4

Max nTPM: 37.7
Min nTPM: 28.8
Sample A Female 29.0
Sample B Female 28.8
Sample C Male 37.7
Sample D Male 35.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.0
Samples: 4

Max nTPM: 31.1
Min nTPM: 25.5
Sample A Male 26.5
Sample B Male 25.5
Sample C Female 28.7
Sample D Female 31.1
Hippocampal formation
nTPM: 31.0
Samples: 4

Max nTPM: 32.5
Min nTPM: 28.6
Sample A Male 28.6
Sample B Male 31.6
Sample C Female 31.3
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
68924425 Antisense, RP_050303_02_C12, Mouse strain C57BL/6J (56 days, male) 4.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org