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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
131.8
nTPM
Monaco:
193.4
nTPM
Schmiedel:
430.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.8
HPA sample
nTPM
gdT-cell nTPM: 100.6
Samples: 6
Max nTPM: 129.2
Min nTPM: 85.0
P10809_1007
85.0
P10809_1022
110.5
P10809_1041
129.2
P10809_1060
87.8
P10809_1077
89.9
P10809_1098
101.0
MAIT T-cell nTPM: 125.6
Samples: 6
Max nTPM: 138.5
Min nTPM: 117.4
P10809_1006
138.5
P10809_1024
130.4
P10809_1043
125.9
P10809_1062
121.9
P10809_1083
117.4
P10809_1097
119.6
Memory CD4 T-cell nTPM: 99.2
Samples: 6
Max nTPM: 103.5
Min nTPM: 92.9
P10809_1014
97.0
P10809_1026
103.5
P10809_1045
101.1
P10809_1064
103.2
P10809_1086
92.9
P10809_1113
97.7
Memory CD8 T-cell nTPM: 100.8
Samples: 5
Max nTPM: 119.7
Min nTPM: 86.9
P10809_1012
95.4
P10809_1027
86.9
P10809_1046
91.8
P10809_1065
110.3
P10809_1111
119.7
Naive CD4 T-cell nTPM: 114.9
Samples: 6
Max nTPM: 123.8
Min nTPM: 104.2
P10809_1015
109.9
P10809_1030
123.0
P10809_1049
123.8
P10809_1068
123.0
P10809_1085
104.2
P10809_1112
105.7
Naive CD8 T-cell nTPM: 106.0
Samples: 6
Max nTPM: 117.0
Min nTPM: 92.1
P10809_1016
117.0
P10809_1031
113.7
P10809_1050
94.4
P10809_1069
111.4
P10809_1087
92.1
P10809_1110
107.1
T-reg nTPM: 131.9
Samples: 6
Max nTPM: 184.0
Min nTPM: 115.5
P10809_1018
131.5
P10809_1037
117.6
P10809_1056
184.0
P10809_1075
115.8
P10809_1094
126.7
P10809_1106
115.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 168.6
Samples: 4
Max nTPM: 203.1
Min nTPM: 149.9
RHH5202_R3573
203.1
RHH5230_R3602
158.9
RHH5259_R3631
162.5
RHH5288_R3660
149.9
Effector memory CD8 T-cell nTPM: 163.5
Samples: 4
Max nTPM: 187.8
Min nTPM: 134.0
RHH5203_R3574
187.8
RHH5231_R3603
134.0
RHH5260_R3632
160.3
RHH5289_R3661
172.0
MAIT T-cell nTPM: 193.5
Samples: 4
Max nTPM: 210.8
Min nTPM: 174.9
RHH5233_R3605
195.7
RHH5205_R3576
192.4
RHH5262_R3634
210.8
RHH5297_R3663
174.9
Memory CD4 T-cell TFH nTPM: 176.6
Samples: 4
Max nTPM: 185.7
Min nTPM: 156.1
RHH5300_R3666
156.1
RHH5236_R3608
183.2
RHH5265_R3637
181.2
RHH5208_R3579
185.7
Memory CD4 T-cell Th1 nTPM: 156.9
Samples: 4
Max nTPM: 172.9
Min nTPM: 145.8
RHH5210_R3581
172.9
RHH5302_R3668
160.6
RHH5238_R3610
148.3
RHH5267_R3639
145.8
Memory CD4 T-cell Th1/Th17 nTPM: 158.4
Samples: 4
Max nTPM: 188.8
Min nTPM: 120.7
RHH5303_R3669
188.8
RHH5211_R3582
178.8
RHH5239_R3611
120.7
RHH5268_R3640
145.4
Memory CD4 T-cell Th17 nTPM: 174.6
Samples: 4
Max nTPM: 208.1
Min nTPM: 138.6
RHH5304_R3670
164.5
RHH5212_R3583
187.2
RHH5240_R3612
208.1
RHH5269_R3641
138.6
Memory CD4 T-cell Th2 nTPM: 183.0
Samples: 4
Max nTPM: 214.5
Min nTPM: 163.3
RHH5305_R3671
163.3
RHH5213_R3584
214.5
RHH5241_R3613
176.5
RHH5270_R3642
177.6
Naive CD4 T-cell nTPM: 173.0
Samples: 4
Max nTPM: 194.8
Min nTPM: 154.4
RHH5306_R3672
154.4
RHH5214_R3585
171.4
RHH5242_R3614
171.2
RHH5271_R3643
194.8
Naive CD8 T-cell nTPM: 189.5
Samples: 4
Max nTPM: 202.7
Min nTPM: 179.5
RHH5201_R3572
202.7
RHH5229_R3601
179.5
RHH5258_R3630
191.5
RHH5287_R3659
184.4
Non-Vd2 gdTCR nTPM: 154.4
Samples: 4
Max nTPM: 179.6
Min nTPM: 128.9
RHH5235_R3607
149.4
RHH5264_R3636
179.6
RHH5207_R3578
159.8
RHH5299_R3665
128.9
T-reg nTPM: 169.2
Samples: 4
Max nTPM: 181.0
Min nTPM: 159.2
RHH5301_R3667
159.2
RHH5237_R3609
181.0
RHH5266_R3638
159.9
RHH5209_R3580
176.7
Terminal effector memory CD4 T-cell nTPM: 136.3
Samples: 2
Max nTPM: 157.9
Min nTPM: 114.6
RHH5243_R3615
114.6
RHH5272_R3644
157.9
Terminal effector memory CD8 T-cell nTPM: 147.6
Samples: 4
Max nTPM: 168.3
Min nTPM: 139.4
RHH5232_R3604
139.4
RHH5204_R3575
139.5
RHH5261_R3633
168.3
RHH5296_R3662
143.0
Vd2 gdTCR nTPM: 174.6
Samples: 4
Max nTPM: 186.2
Min nTPM: 159.9
RHH5234_R3606
186.2
RHH5206_R3577
169.8
RHH5263_R3635
182.5
RHH5298_R3664
159.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
