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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
69.7
nTPM
Monaco:
318.7
nTPM
Schmiedel:
153.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
69.7
HPA sample
nTPM
gdT-cell nTPM: 59.4
Samples: 6
Max nTPM: 79.4
Min nTPM: 47.1
P10809_1007
47.1
P10809_1022
79.4
P10809_1041
55.2
P10809_1060
54.3
P10809_1077
70.0
P10809_1098
50.5
MAIT T-cell nTPM: 47.8
Samples: 6
Max nTPM: 61.2
Min nTPM: 36.0
P10809_1006
59.3
P10809_1024
61.2
P10809_1043
36.0
P10809_1062
46.1
P10809_1083
38.2
P10809_1097
45.9
Memory CD4 T-cell nTPM: 43.5
Samples: 6
Max nTPM: 47.3
Min nTPM: 35.3
P10809_1014
45.4
P10809_1026
35.3
P10809_1045
44.0
P10809_1064
42.8
P10809_1086
47.3
P10809_1113
46.4
Memory CD8 T-cell nTPM: 52.9
Samples: 5
Max nTPM: 63.6
Min nTPM: 45.9
P10809_1012
63.6
P10809_1027
55.2
P10809_1046
45.9
P10809_1065
53.8
P10809_1111
46.2
Naive CD4 T-cell nTPM: 65.1
Samples: 6
Max nTPM: 78.4
Min nTPM: 54.1
P10809_1015
67.6
P10809_1030
54.1
P10809_1049
55.5
P10809_1068
78.4
P10809_1085
73.6
P10809_1112
61.6
Naive CD8 T-cell nTPM: 69.7
Samples: 6
Max nTPM: 82.3
Min nTPM: 58.7
P10809_1016
58.7
P10809_1031
82.3
P10809_1050
60.4
P10809_1069
73.9
P10809_1087
73.9
P10809_1110
68.8
T-reg nTPM: 44.4
Samples: 6
Max nTPM: 50.4
Min nTPM: 33.3
P10809_1018
45.9
P10809_1037
50.3
P10809_1056
33.3
P10809_1075
50.4
P10809_1094
39.2
P10809_1106
47.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
318.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 232.3
Samples: 4
Max nTPM: 251.5
Min nTPM: 192.2
RHH5202_R3573
239.3
RHH5230_R3602
246.1
RHH5259_R3631
251.5
RHH5288_R3660
192.2
Effector memory CD8 T-cell nTPM: 255.2
Samples: 4
Max nTPM: 283.2
Min nTPM: 219.0
RHH5203_R3574
283.2
RHH5231_R3603
219.0
RHH5260_R3632
265.5
RHH5289_R3661
253.2
MAIT T-cell nTPM: 192.9
Samples: 4
Max nTPM: 242.2
Min nTPM: 161.4
RHH5233_R3605
242.2
RHH5205_R3576
196.2
RHH5262_R3634
171.8
RHH5297_R3663
161.4
Memory CD4 T-cell TFH nTPM: 199.7
Samples: 4
Max nTPM: 250.3
Min nTPM: 168.2
RHH5300_R3666
179.4
RHH5236_R3608
168.2
RHH5265_R3637
200.7
RHH5208_R3579
250.3
Memory CD4 T-cell Th1 nTPM: 192.0
Samples: 4
Max nTPM: 216.3
Min nTPM: 174.0
RHH5210_R3581
187.2
RHH5302_R3668
174.0
RHH5238_R3610
216.3
RHH5267_R3639
190.6
Memory CD4 T-cell Th1/Th17 nTPM: 192.3
Samples: 4
Max nTPM: 258.9
Min nTPM: 159.3
RHH5303_R3669
180.0
RHH5211_R3582
159.3
RHH5239_R3611
258.9
RHH5268_R3640
170.8
Memory CD4 T-cell Th17 nTPM: 189.3
Samples: 4
Max nTPM: 225.9
Min nTPM: 161.4
RHH5304_R3670
181.7
RHH5212_R3583
161.4
RHH5240_R3612
225.9
RHH5269_R3641
188.1
Memory CD4 T-cell Th2 nTPM: 192.8
Samples: 4
Max nTPM: 217.6
Min nTPM: 174.9
RHH5305_R3671
193.8
RHH5213_R3584
174.9
RHH5241_R3613
217.6
RHH5270_R3642
184.8
Naive CD4 T-cell nTPM: 240.6
Samples: 4
Max nTPM: 257.7
Min nTPM: 228.4
RHH5306_R3672
233.0
RHH5214_R3585
257.7
RHH5242_R3614
228.4
RHH5271_R3643
243.1
Naive CD8 T-cell nTPM: 276.8
Samples: 4
Max nTPM: 295.9
Min nTPM: 240.7
RHH5201_R3572
279.6
RHH5229_R3601
295.9
RHH5258_R3630
240.7
RHH5287_R3659
290.8
Non-Vd2 gdTCR nTPM: 318.7
Samples: 4
Max nTPM: 353.2
Min nTPM: 293.6
RHH5235_R3607
320.3
RHH5264_R3636
353.2
RHH5207_R3578
307.8
RHH5299_R3665
293.6
T-reg nTPM: 157.6
Samples: 4
Max nTPM: 169.2
Min nTPM: 140.8
RHH5301_R3667
140.8
RHH5237_R3609
166.5
RHH5266_R3638
153.9
RHH5209_R3580
169.2
Terminal effector memory CD4 T-cell nTPM: 240.0
Samples: 2
Max nTPM: 267.2
Min nTPM: 212.7
RHH5243_R3615
212.7
RHH5272_R3644
267.2
Terminal effector memory CD8 T-cell nTPM: 304.7
Samples: 4
Max nTPM: 353.7
Min nTPM: 258.1
RHH5232_R3604
353.7
RHH5204_R3575
258.1
RHH5261_R3633
310.3
RHH5296_R3662
296.6
Vd2 gdTCR nTPM: 234.7
Samples: 4
Max nTPM: 288.0
Min nTPM: 197.7
RHH5234_R3606
232.4
RHH5206_R3577
197.7
RHH5263_R3635
288.0
RHH5298_R3664
220.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
