HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:748.7 nTPM
HPA Brain:299.7 nTPM
GTEx:748.7 nTPM
FANTOM5:12.1 Scaled Tags Per Million
Pig:278.8 nTPM
Mouse:351.2 nTPM
Allen mouse:10.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 299.7
Sample id Sample description nTPM
Hippocampus
nTPM: 299.7
1898 Male, age 80, left hemisphere 363.5
2529 Female, age 94, left hemisphere 309.7
2621 Female, age 67, right hemisphere 307.0
1855 Male, age 76, left hemisphere 287.4
1911 Female, age 85, right hemisphere 278.5
2148 Female, age 91, left hemisphere 252.1
Dentate gyrus
nTPM: 295.7
2530 Female, age 94, left hemisphere 384.6
2010 Male, age 76, both hemispheres 327.9
1927 Female, age 91, both hemispheres 274.5
2531 Female, age 67, both hemispheres 271.1
2528 Male, age 74, both hemispheres 264.7
2246 Female, age 85, both hemispheres 251.7
Entorhinal gyrus
nTPM: 294.2
2686 Male, age 75, right hemisphere 356.3
2117 Female, age 91, right hemisphere 310.6
1787 Male, age 76, left hemisphere 295.0
1938 Female, age 85, left hemisphere 289.0
2764 Male, age 80, right hemisphere 287.9
2613 Female, age 94, left hemisphere 226.7
Hippocampus, CA1
nTPM: 278.3
2045 Male, age 76, both hemispheres 307.5
2082 Female, age 91, right hemisphere 301.2
1873 Female, age 85, both hemispheres 292.8
2749 Male, age 80, left hemisphere 249.0
2527 Male, age 74, both hemispheres 240.9
Hippocampus, CA2
nTPM: 295.8
1963 Male, age 80, left hemisphere 333.3
1940 Female, age 85, left hemisphere 311.8
1892 Male, age 76, both hemispheres 305.6
2113 Female, age 91, right hemisphere 280.9
2249 Male, age 74, both hemispheres 277.0
2437 Female, age 94, left hemisphere 266.2
Hippocampus, CA3
nTPM: 257.1
1867 Male, age 76, both hemispheres 317.6
1891 Female, age 85, both hemispheres 305.1
2861 Female, age 67, both hemispheres 252.0
2436 Male, age 74, both hemispheres 244.6
2137 Male, age 80, left hemisphere 224.4
2620 Female, age 94, left hemisphere 199.2
Parahippocampal cortex
nTPM: 257.9
2018 Male, age 76, both hemispheres 357.0
1850 Male, age 80, both hemispheres 284.0
2250 Female, age 67, right hemisphere 278.8
1933 Female, age 85, both hemispheres 277.6
1990 Female, age 91, right hemisphere 265.8
2532 Female, age 72, left hemisphere 244.2
2692 Male, age 74, both hemispheres 230.3
2245 Female, age 91, both hemispheres 228.5
2693 Female, age 94, both hemispheres 215.0
2622 Female, age 67, right hemisphere 198.1
Perirhinal gyrus
nTPM: 280.8
1841 Female, age 85, right hemisphere 307.0
1847 Female, age 91, left hemisphere 303.8
1794 Male, age 80, right hemisphere 289.5
2848 Male, age 76, right hemisphere 271.4
2521 Female, age 94, right hemisphere 232.5
Subiculum
nTPM: 285.3
2042 Male, age 76, both hemispheres 353.5
1977 Female, age 85, both hemispheres 310.3
2729 Female, age 91, right hemisphere 282.8
1901 Male, age 80, both hemispheres 278.0
2438 Female, age 94, left hemisphere 246.8
2619 Male, age 74, both hemispheres 240.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 748.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 748.7
Samples: 197

Max nTPM: 2275.0
Min nTPM: 342.9
Std nTPM: 269.0
Median nTPM: 686.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2275.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1891.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1637.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1562.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1500.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1453.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 1364.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1349.6
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1263.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1251.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 1232.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.1
FF:10153-102I9 76 years, female 12.9
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 278.8
Pig sample Sample description nTPM
Subiculum
nTPM: 237.1
Samples: 4

Max nTPM: 326.2
Min nTPM: 196.8
Sample A Female 326.2
Sample B Female 225.1
Sample C Male 196.8
Sample D Male 200.3
Dorsal hippocampus
nTPM: 278.9
Samples: 4

Max nTPM: 364.9
Min nTPM: 176.9
Sample A Female 364.9
Sample B Female 254.1
Sample C Male 319.5
Sample D Male 176.9
Entorhinal cortex
nTPM: 237.1
Samples: 4

Max nTPM: 308.8
Min nTPM: 174.3
Sample A Female 191.6
Sample B Female 308.8
Sample C Male 273.7
Sample D Male 174.3
Ventral hippocampus
nTPM: 241.7
Samples: 4

Max nTPM: 295.8
Min nTPM: 203.4
Sample A Female 246.6
Sample B Female 203.4
Sample C Male 295.8
Sample D Male 221.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 351.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 344.4
Samples: 4

Max nTPM: 364.5
Min nTPM: 303.5
Sample A Male 353.8
Sample B Male 355.8
Sample C Female 364.5
Sample D Female 303.5
Hippocampal formation
nTPM: 351.2
Samples: 4

Max nTPM: 393.2
Min nTPM: 321.3
Sample A Male 393.2
Sample B Male 332.1
Sample C Female 321.3
Sample D Female 358.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.5
69549280 Antisense, RP_050126_02_C10, Mouse strain C57BL/6J (56 days, male) 10.5

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