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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
320.6
nTPM
GTEx:
320.6
nTPM
FANTOM5:
10.8
Scaled Tags Per Million
Pig:
102.6
nTPM
Mouse:
640.8
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
320.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 320.6
Samples: 105
Max nTPM: 497.3
Min nTPM: 130.4
Std nTPM: 83.9
Median nTPM:
321_1
62 years, female
497.3
218_1
71 years, female
476.9
379_1
60 years, male
476.1
452_1
88 years, female
469.5
386_1
76 years, male
456.4
377_1
82 years, female
449.7
384_1
83 years, male
448.4
355_1
70 years, female
443.6
351_1
91 years, male
436.3
354_1
81 years, female
429.6
319_1
81 years, male
429.5
376_1
75 years, female
426.5
447_1
81 years, male
425.6
353_1
82 years, female
413.1
322_1
76 years, male
412.8
389_1
86 years, female
411.6
349_1
83 years, male
406.1
243_1
75 years, male
393.7
2_1
77 years, female
388.6
177_1
74 years, male
385.4
352_1
62 years, male
383.0
394_1
75 years, female
382.8
237_1
82 years, male
379.3
506_1
65 years, male
377.9
6_1
73 years, female
375.9
317_1
60 years, male
375.9
295_1
61 years, female
375.1
163_1
78 years, male
374.6
320_1
89 years, female
368.6
172_1
72 years, female
366.2
375_1
74 years, female
365.9
348_1
84 years, male
362.1
17_1
71 years, male
360.1
335_1
73 years, female
358.4
350_1
84 years, female
357.0
189_1
76 years, male
355.4
35_1
74 years, female
354.3
503_1
68 years, male
353.9
120_1
70 years, female
347.9
316_1
62 years, male
347.8
4_1
88 years, female
346.5
137_1
83 years, male
346.1
153_1
70 years, female
345.8
286_1
68 years, female
345.2
251_1
78 years, male
343.5
291_1
76 years, male
343.2
517_1
88 years, male
342.1
396_1
62 years, male
341.1
246_1
77 years, male
340.5
405_1
91 years, male
339.5
173_1
67 years, male
338.5
347_1
72 years, male
337.7
356_1
87 years, female
336.4
404_1
82 years, female
335.0
480_1
63 years, male
335.0
293_1
68 years, female
334.6
145_1
84 years, male
333.0
318_1
68 years, male
331.9
264_1
73 years, female
331.7
406_1
79 years, male
327.2
425_1
59 years, female
326.9
292_1
71 years, male
324.2
99_1
64 years, male
324.0
115_1
83 years, male
323.3
18_1
88 years, male
315.7
526_1
61 years, male
312.3
229_1
69 years, female
306.2
311_1
78 years, male
303.1
126_1
63 years, male
293.3
265_1
87 years, male
291.7
307_1
66 years, female
291.0
266_1
85 years, male
287.9
217_1
76 years, male
284.9
41_1
94 years, female
280.7
518_1
75 years, female
273.4
42_1
85 years, male
269.7
314_1
67 years, male
265.5
254_1
77 years, female
263.1
468_1
89 years, male
259.9
9_1
66 years, female
259.5
117_1
61 years, male
253.6
119_1
70 years, female
250.5
288_1
66 years, female
245.7
139_1
64 years, female
242.2
324_1
76 years, male
240.6
315_1
62 years, female
237.0
109_1
81 years, female
233.2
495_1
57 years, female
219.9
499_1
55 years, female
214.4
142_1
61 years, female
212.8
81_1
67 years, male
211.7
313_1
79 years, female
208.0
162_1
79 years, female
207.4
32_1
67 years, male
206.8
308_1
70 years, female
197.8
415_1
77 years, female
194.1
466_1
57 years, female
189.7
501_1
88 years, male
176.9
89_1
63 years, male
175.5
414_1
84 years, female
174.9
491_1
89 years, female
173.4
43_1
64 years, female
165.9
490_1
67 years, female
133.7
149_1
88 years, male
132.8
413_1
59 years, female
130.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.