HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:19.3 nTPM
HPA Brain:199.1 nTPM
GTEx:19.3 nTPM
FANTOM5:64.6 Scaled Tags Per Million
Pig:58.6 nTPM
Mouse:31.4 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013952
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 199.1
Sample id Sample description nTPM
Hippocampus
nTPM: 188.6
1855 Male, age 76, left hemisphere 244.9
2148 Female, age 91, left hemisphere 221.3
2621 Female, age 67, right hemisphere 208.0
1898 Male, age 80, left hemisphere 197.6
1911 Female, age 85, right hemisphere 131.1
2529 Female, age 94, left hemisphere 128.7
Dentate gyrus
nTPM: 199.1
2530 Female, age 94, left hemisphere 237.5
2531 Female, age 67, both hemispheres 232.6
1927 Female, age 91, both hemispheres 209.7
2010 Male, age 76, both hemispheres 199.5
2528 Male, age 74, both hemispheres 162.7
2246 Female, age 85, both hemispheres 152.4
Entorhinal gyrus
nTPM: 138.4
2613 Female, age 94, left hemisphere 177.3
1787 Male, age 76, left hemisphere 150.5
1938 Female, age 85, left hemisphere 144.5
2764 Male, age 80, right hemisphere 137.8
2117 Female, age 91, right hemisphere 113.8
2686 Male, age 75, right hemisphere 106.7
Hippocampus, CA1
nTPM: 188.9
2749 Male, age 80, left hemisphere 275.3
2045 Male, age 76, both hemispheres 206.7
1873 Female, age 85, both hemispheres 200.2
2527 Male, age 74, both hemispheres 143.3
2082 Female, age 91, right hemisphere 119.1
Hippocampus, CA2
nTPM: 163.3
1963 Male, age 80, left hemisphere 237.0
1892 Male, age 76, both hemispheres 230.4
2437 Female, age 94, left hemisphere 156.3
2249 Male, age 74, both hemispheres 125.0
1940 Female, age 85, left hemisphere 116.9
2113 Female, age 91, right hemisphere 113.9
Hippocampus, CA3
nTPM: 190.9
2861 Female, age 67, both hemispheres 277.4
2620 Female, age 94, left hemisphere 272.1
2137 Male, age 80, left hemisphere 225.9
1867 Male, age 76, both hemispheres 140.7
1891 Female, age 85, both hemispheres 121.3
2436 Male, age 74, both hemispheres 108.2
Parahippocampal cortex
nTPM: 118.5
2245 Female, age 91, both hemispheres 133.8
2622 Female, age 67, right hemisphere 124.3
2532 Female, age 72, left hemisphere 122.1
1990 Female, age 91, right hemisphere 120.9
2693 Female, age 94, both hemispheres 117.6
1850 Male, age 80, both hemispheres 116.8
1933 Female, age 85, both hemispheres 116.8
2018 Male, age 76, both hemispheres 112.5
2250 Female, age 67, right hemisphere 111.4
2692 Male, age 74, both hemispheres 108.4
Perirhinal gyrus
nTPM: 129.4
2521 Female, age 94, right hemisphere 151.0
1847 Female, age 91, left hemisphere 145.7
1794 Male, age 80, right hemisphere 125.2
2848 Male, age 76, right hemisphere 120.2
1841 Female, age 85, right hemisphere 105.1
Subiculum
nTPM: 125.6
2729 Female, age 91, right hemisphere 145.8
1901 Male, age 80, both hemispheres 140.1
2042 Male, age 76, both hemispheres 129.4
1977 Female, age 85, both hemispheres 128.1
2438 Female, age 94, left hemisphere 112.3
2619 Male, age 74, both hemispheres 97.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 74.1
Min nTPM: 1.7
Std nTPM: 9.8
Median nTPM: 17.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 74.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 62.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 59.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 50.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 43.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 42.4
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 40.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 39.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 38.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 37.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 37.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.6
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 54.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.6
Pig sample Sample description nTPM
Subiculum
nTPM: 50.8
Samples: 4

Max nTPM: 66.8
Min nTPM: 40.4
Sample A Female 66.8
Sample B Female 40.5
Sample C Male 55.3
Sample D Male 40.4
Dorsal hippocampus
nTPM: 56.4
Samples: 4

Max nTPM: 67.7
Min nTPM: 40.6
Sample A Female 67.7
Sample B Female 67.7
Sample C Male 49.4
Sample D Male 40.6
Entorhinal cortex
nTPM: 58.7
Samples: 4

Max nTPM: 64.6
Min nTPM: 49.3
Sample A Female 64.6
Sample B Female 49.3
Sample C Male 64.4
Sample D Male 56.3
Ventral hippocampus
nTPM: 57.4
Samples: 4

Max nTPM: 74.3
Min nTPM: 34.8
Sample A Female 53.1
Sample B Female 34.8
Sample C Male 74.3
Sample D Male 67.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.4
Samples: 4

Max nTPM: 45.5
Min nTPM: 24.4
Sample A Male 30.2
Sample B Male 25.5
Sample C Female 24.4
Sample D Female 45.5
Hippocampal formation
nTPM: 29.9
Samples: 4

Max nTPM: 39.4
Min nTPM: 17.4
Sample A Male 17.4
Sample B Male 38.0
Sample C Female 39.4
Sample D Female 24.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
69237065 Antisense, RP_050331_01_G05, Mouse strain C57BL/6J (56 days, male) 2.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org