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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
85.6
nTPM
FANTOM5:
31.8
Scaled Tags Per Million
Pig:
38.6
nTPM
Allen mouse:
0.9
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
85.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 75.6
2301
Female, age 85, both hemispheres
86.0
2090
Male, age 80, both hemispheres
83.4
2188
Female, age 91, both hemispheres
77.0
1984
Male, age 76, both hemispheres
55.9
Dorsal cochlear nucleus nTPM: 79.7
2802
Male, age 74, right hemisphere
88.2
2370
Male, age 61, both hemispheres
85.8
2187
Female, age 91, both hemispheres
81.4
2378
Male, age 80, both hemispheres
75.3
2058
Male, age 76, both hemispheres
67.9
Dorsal tegmental nucleus nTPM: 67.4
2083
Male, age 80, both hemispheres
83.8
2326
Male, age 74, both hemispheres
73.9
1936
Male, age 76, left hemisphere
57.9
2358
Male, age 61, both hemispheres
54.2
Dorsolateral tegmental area nTPM: 69.1
2654
Male, age 80, both hemispheres
78.8
2751
Female, age 85, both hemispheres
75.6
2141
Male, age 76, both hemispheres
66.4
2360
Male, age 74, both hemispheres
65.9
2337
Male, age 61, both hemispheres
58.9
Kolliker-Fuse nucleus nTPM: 68.9
2793
Female, age 91, left hemisphere
89.8
2163
Male, age 80, both hemispheres
72.8
2315
Male, age 76, right hemisphere
44.1
Lateral lemniscal nuclei nTPM: 85.1
2453
Male, age 74, right hemisphere
92.1
2320
Female, age 91, left hemisphere
85.3
2746
Female, age 85, left hemisphere
85.3
2169
Male, age 76, both hemispheres
82.1
2036
Male, age 80, both hemispheres
81.0
Lateral parabrachial nucleus nTPM: 72.7
2139
Female, age 85, right hemisphere
81.5
2013
Male, age 80, both hemispheres
76.8
2790
Male, age 61, both hemispheres
67.1
2792
Male, age 76, both hemispheres
65.5
Lateral vestibular nucleus nTPM: 77.8
2311
Male, age 80, both hemispheres
79.9
2184
Male, age 76, both hemispheres
75.8
Locus coeruleus nTPM: 57.6
2162
Male, age 80, both hemispheres
66.2
2317
Female, age 72, unknown
61.6
2720
Male, age 74, both hemispheres
59.4
2123
Female, age 91, both hemispheres
58.8
2014
Male, age 55, unknown
55.6
2788
Male, age 74, unknown
51.2
1980
Male, age 76, both hemispheres
50.7
Medial parabrachial nucleus nTPM: 74.5
2170
Female, age 91, both hemispheres
81.4
2156
Male, age 61, both hemispheres
75.0
2854
Male, age 80, both hemispheres
73.7
2786
Male, age 76, both hemispheres
71.8
2463
Female, age 85, right hemisphere
70.7
Medial periolivary nuclei nTPM: 80.1
2081
Male, age 80, both hemispheres
83.2
2791
Male, age 74, right hemisphere
82.2
2171
Female, age 85, both hemispheres
81.6
2458
Female, age 91, both hemispheres
78.0
2063
Male, age 76, both hemispheres
75.7
Motor facial nucleus nTPM: 85.6
2126
Male, age 61, both hemispheres
106.4
2365
Male, age 74, right hemisphere
88.1
2795
Female, age 91, both hemispheres
83.3
2062
Male, age 76, both hemispheres
81.9
2327
Male, age 80, both hemispheres
77.8
2697
Female, age 85, both hemispheres
76.0
Motor trigeminal nucleus nTPM: 80.7
2560
Male, age 74, both hemispheres
93.3
2335
Male, age 61, both hemispheres
82.7
2321
Female, age 91, both hemispheres
81.7
2079
Male, age 80, both hemispheres
75.1
2309
Male, age 76, both hemispheres
70.5
Nuclei of the trapezoid body nTPM: 85.2
2159
Male, age 61, both hemispheres
97.2
2368
Female, age 91, both hemispheres
88.1
2735
Female, age 85, both hemispheres
84.0
2166
Male, age 80, both hemispheres
82.3
1983
Male, age 76, both hemispheres
74.2
Nucleus raphe magnus nTPM: 82.8
2455
Male, age 74, both hemispheres
86.3
2459
Female, age 91, both hemispheres
84.8
2172
Female, age 85, both hemispheres
82.6
2051
Male, age 76, both hemispheres
81.3
2328
Male, age 80, both hemispheres
81.0
2160
Male, age 61, both hemispheres
80.6
Paramedian reticular nucleus nTPM: 70.8
2057
Male, age 80, both hemispheres
81.2
2313
Male, age 61, both hemispheres
79.7
2050
Female, age 85, both hemispheres
73.5
2052
Male, age 76, both hemispheres
49.0
Pedunculopontine tegmental nucleus nTPM: 62.9
1921
Female, age 85, both hemispheres
68.2
2334
Male, age 80, both hemispheres
67.4
2338
Male, age 61, both hemispheres
53.0
Pontine nuclei nTPM: 82.9
2787
Female, age 85, both hemispheres
93.6
2454
Male, age 74, left hemisphere
86.6
2115
Male, age 80, left hemisphere
85.1
1968
Male, age 76, left hemisphere
84.2
2109
Female, age 72, unknown
81.8
1863
Male, age 55, unknown
78.4
2319
Female, age 91, both hemispheres
78.2
2727
Male, age 61, right hemisphere
75.0
Pontine raphe nucleus nTPM: 66.7
2122
Female, age 85, midline
74.2
2853
Male, age 76, midline
59.1
Posteroventral cochlear nucleus nTPM: 74.0
2752
Female, age 85, both hemispheres
77.4
2371
Male, age 61, both hemispheres
74.5
2070
Male, age 76, both hemispheres
73.7
2135
Female, age 91, both hemispheres
73.0
2341
Male, age 80, both hemispheres
71.2
Principal sensory trigeminal nucleus nTPM: 75.2
2158
Male, age 61, both hemispheres
81.6
2367
Female, age 91, left hemisphere
80.7
2008
Male, age 80, left hemisphere
72.7
2324
Male, age 76, both hemispheres
65.8
Reticular pontine nucleus, caudal nTPM: 81.6
2559
Male, age 74, both hemispheres
88.9
2457
Female, age 91, both hemispheres
82.8
2332
Male, age 80, right hemisphere
79.0
2092
Male, age 76, both hemispheres
75.6
Reticular pontine nucleus, oral nTPM: 75.3
2361
Male, age 74, both hemispheres
87.5
2366
Female, age 91, both hemispheres
78.4
2012
Female, age 85, both hemispheres
74.7
1939
Male, age 80, both hemispheres
70.3
2167
Male, age 76, both hemispheres
65.8
Reticulotegmental nucleus nTPM: 78.0
2452
Male, age 74, both hemispheres
89.7
2322
Female, age 91, both hemispheres
82.9
2333
Male, age 80, both hemispheres
79.8
2325
Male, age 76, both hemispheres
59.7
Spinal trigeminal nucleus, oral nTPM: 78.2
1978
Male, age 76, both hemispheres
91.7
2164
Male, age 80, both hemispheres
77.5
2737
Female, age 85, both hemispheres
65.5
Subcoeruleus area nTPM: 75.3
2089
Male, age 76, left hemisphere
85.7
2369
Female, age 85, left hemisphere
78.2
2451
Male, age 74, both hemispheres
74.0
1958
Male, age 80, both hemispheres
70.0
2323
Female, age 91, left hemisphere
68.7
Superior olive nTPM: 82.1
2561
Female, age 91, both hemispheres
86.3
2329
Male, age 80, right hemisphere
84.6
2364
Male, age 74, right hemisphere
83.6
2020
Male, age 76, both hemispheres
79.2
1875
Female, age 85, both hemispheres
76.6
Ventral periolivary nuclei nTPM: 79.2
2130
Female, age 85, both hemispheres
86.3
2165
Male, age 80, both hemispheres
80.8
2794
Female, age 91, left hemisphere
75.3
2023
Male, age 76, both hemispheres
74.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 78.5
2449
Male, age 74, both hemispheres
91.5
2456
Female, age 91, both hemispheres
87.9
1959
Male, age 76, both hemispheres
79.2
2161
Male, age 80, both hemispheres
78.3
2840
Female, age 85, both hemispheres
74.7
2359
Male, age 61, both hemispheres
59.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
38.6
Pig sample
Sample description
nTPM
Pons nTPM: 38.6
Samples: 4
Max nTPM: 59.1
Min nTPM: 30.7
Sample A
Female
59.1
Sample B
Female
32.8
Sample C
Male
31.7
Sample D
Male
30.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
