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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.4
nTPM
Monaco:
145.4
nTPM
Schmiedel:
70.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.4
HPA sample
nTPM
gdT-cell nTPM: 52.1
Samples: 6
Max nTPM: 73.2
Min nTPM: 40.9
P10809_1007
40.9
P10809_1022
73.2
P10809_1041
51.5
P10809_1060
41.3
P10809_1077
49.9
P10809_1098
55.5
MAIT T-cell nTPM: 55.6
Samples: 6
Max nTPM: 77.7
Min nTPM: 41.9
P10809_1006
53.6
P10809_1024
77.7
P10809_1043
41.9
P10809_1062
44.3
P10809_1083
45.3
P10809_1097
70.9
Memory CD4 T-cell nTPM: 50.2
Samples: 6
Max nTPM: 60.9
Min nTPM: 38.4
P10809_1014
45.1
P10809_1026
38.4
P10809_1045
60.9
P10809_1064
46.7
P10809_1086
57.7
P10809_1113
52.3
Memory CD8 T-cell nTPM: 56.5
Samples: 5
Max nTPM: 63.2
Min nTPM: 47.8
P10809_1012
50.2
P10809_1027
59.5
P10809_1046
61.7
P10809_1065
47.8
P10809_1111
63.2
Naive CD4 T-cell nTPM: 50.4
Samples: 6
Max nTPM: 60.0
Min nTPM: 44.1
P10809_1015
46.9
P10809_1030
44.1
P10809_1049
60.0
P10809_1068
46.4
P10809_1085
58.0
P10809_1112
47.1
Naive CD8 T-cell nTPM: 57.9
Samples: 6
Max nTPM: 70.2
Min nTPM: 42.4
P10809_1016
42.4
P10809_1031
70.2
P10809_1050
59.9
P10809_1069
56.9
P10809_1087
62.2
P10809_1110
55.6
T-reg nTPM: 79.4
Samples: 6
Max nTPM: 111.7
Min nTPM: 51.3
P10809_1018
51.3
P10809_1037
92.7
P10809_1056
77.3
P10809_1075
54.3
P10809_1094
111.7
P10809_1106
89.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
145.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 111.3
Samples: 4
Max nTPM: 138.7
Min nTPM: 87.3
RHH5202_R3573
87.3
RHH5230_R3602
103.1
RHH5259_R3631
138.7
RHH5288_R3660
116.2
Effector memory CD8 T-cell nTPM: 145.4
Samples: 4
Max nTPM: 165.2
Min nTPM: 118.2
RHH5203_R3574
136.8
RHH5231_R3603
118.2
RHH5260_R3632
165.2
RHH5289_R3661
161.3
MAIT T-cell nTPM: 140.2
Samples: 4
Max nTPM: 177.4
Min nTPM: 97.4
RHH5233_R3605
146.0
RHH5205_R3576
140.0
RHH5262_R3634
177.4
RHH5297_R3663
97.4
Memory CD4 T-cell TFH nTPM: 108.0
Samples: 4
Max nTPM: 139.3
Min nTPM: 88.8
RHH5300_R3666
88.8
RHH5236_R3608
105.7
RHH5265_R3637
139.3
RHH5208_R3579
98.3
Memory CD4 T-cell Th1 nTPM: 112.9
Samples: 4
Max nTPM: 145.3
Min nTPM: 96.4
RHH5210_R3581
104.6
RHH5302_R3668
96.4
RHH5238_R3610
105.2
RHH5267_R3639
145.3
Memory CD4 T-cell Th1/Th17 nTPM: 119.7
Samples: 4
Max nTPM: 136.6
Min nTPM: 91.7
RHH5303_R3669
136.6
RHH5211_R3582
91.7
RHH5239_R3611
119.9
RHH5268_R3640
130.6
Memory CD4 T-cell Th17 nTPM: 122.8
Samples: 4
Max nTPM: 144.6
Min nTPM: 97.5
RHH5304_R3670
113.7
RHH5212_R3583
97.5
RHH5240_R3612
144.6
RHH5269_R3641
135.5
Memory CD4 T-cell Th2 nTPM: 116.7
Samples: 4
Max nTPM: 134.9
Min nTPM: 104.8
RHH5305_R3671
104.8
RHH5213_R3584
111.4
RHH5241_R3613
115.8
RHH5270_R3642
134.9
Naive CD4 T-cell nTPM: 105.0
Samples: 4
Max nTPM: 152.1
Min nTPM: 83.3
RHH5306_R3672
86.0
RHH5214_R3585
98.6
RHH5242_R3614
83.3
RHH5271_R3643
152.1
Naive CD8 T-cell nTPM: 116.3
Samples: 4
Max nTPM: 122.2
Min nTPM: 105.4
RHH5201_R3572
122.2
RHH5229_R3601
121.5
RHH5258_R3630
105.4
RHH5287_R3659
116.0
Non-Vd2 gdTCR nTPM: 144.4
Samples: 4
Max nTPM: 163.9
Min nTPM: 122.3
RHH5235_R3607
153.3
RHH5264_R3636
163.9
RHH5207_R3578
138.1
RHH5299_R3665
122.3
T-reg nTPM: 113.3
Samples: 4
Max nTPM: 139.9
Min nTPM: 95.9
RHH5301_R3667
101.4
RHH5237_R3609
115.9
RHH5266_R3638
139.9
RHH5209_R3580
95.9
Terminal effector memory CD4 T-cell nTPM: 133.0
Samples: 2
Max nTPM: 133.2
Min nTPM: 132.8
RHH5243_R3615
133.2
RHH5272_R3644
132.8
Terminal effector memory CD8 T-cell nTPM: 126.4
Samples: 4
Max nTPM: 163.8
Min nTPM: 77.3
RHH5232_R3604
128.4
RHH5204_R3575
77.3
RHH5261_R3633
163.8
RHH5296_R3662
135.9
Vd2 gdTCR nTPM: 122.8
Samples: 4
Max nTPM: 147.8
Min nTPM: 97.9
RHH5234_R3606
132.9
RHH5206_R3577
97.9
RHH5263_R3635
147.8
RHH5298_R3664
112.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
