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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
81.5
nTPM
Monaco:
39.5
nTPM
Schmiedel:
42.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
81.5
HPA sample
nTPM
gdT-cell nTPM: 44.2
Samples: 6
Max nTPM: 52.4
Min nTPM: 36.1
P10809_1007
36.1
P10809_1022
47.9
P10809_1041
46.0
P10809_1060
37.9
P10809_1077
45.1
P10809_1098
52.4
MAIT T-cell nTPM: 45.9
Samples: 6
Max nTPM: 53.7
Min nTPM: 35.3
P10809_1006
35.3
P10809_1024
47.1
P10809_1043
51.9
P10809_1062
43.7
P10809_1083
43.4
P10809_1097
53.7
Memory CD4 T-cell nTPM: 51.8
Samples: 6
Max nTPM: 58.8
Min nTPM: 43.6
P10809_1014
45.4
P10809_1026
43.6
P10809_1045
55.8
P10809_1064
58.8
P10809_1086
51.2
P10809_1113
56.0
Memory CD8 T-cell nTPM: 45.8
Samples: 5
Max nTPM: 55.8
Min nTPM: 35.1
P10809_1012
35.1
P10809_1027
43.4
P10809_1046
55.8
P10809_1065
47.7
P10809_1111
47.0
Naive CD4 T-cell nTPM: 48.7
Samples: 6
Max nTPM: 60.1
Min nTPM: 39.7
P10809_1015
39.7
P10809_1030
43.8
P10809_1049
60.1
P10809_1068
51.5
P10809_1085
46.8
P10809_1112
50.4
Naive CD8 T-cell nTPM: 46.9
Samples: 6
Max nTPM: 57.4
Min nTPM: 35.8
P10809_1016
35.8
P10809_1031
48.8
P10809_1050
44.3
P10809_1069
54.1
P10809_1087
57.4
P10809_1110
40.8
T-reg nTPM: 81.5
Samples: 6
Max nTPM: 94.6
Min nTPM: 56.8
P10809_1018
56.8
P10809_1037
86.2
P10809_1056
94.6
P10809_1075
94.2
P10809_1094
74.0
P10809_1106
83.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.0
Samples: 4
Max nTPM: 35.3
Min nTPM: 27.9
RHH5202_R3573
29.8
RHH5230_R3602
35.3
RHH5259_R3631
27.9
RHH5288_R3660
30.8
Effector memory CD8 T-cell nTPM: 33.0
Samples: 4
Max nTPM: 35.0
Min nTPM: 29.1
RHH5203_R3574
29.1
RHH5231_R3603
35.0
RHH5260_R3632
33.6
RHH5289_R3661
34.1
MAIT T-cell nTPM: 26.6
Samples: 4
Max nTPM: 33.3
Min nTPM: 19.7
RHH5233_R3605
33.3
RHH5205_R3576
28.6
RHH5262_R3634
24.7
RHH5297_R3663
19.7
Memory CD4 T-cell TFH nTPM: 34.1
Samples: 4
Max nTPM: 43.2
Min nTPM: 29.9
RHH5300_R3666
31.3
RHH5236_R3608
43.2
RHH5265_R3637
31.8
RHH5208_R3579
29.9
Memory CD4 T-cell Th1 nTPM: 31.8
Samples: 4
Max nTPM: 39.1
Min nTPM: 25.9
RHH5210_R3581
25.9
RHH5302_R3668
34.6
RHH5238_R3610
39.1
RHH5267_R3639
27.5
Memory CD4 T-cell Th1/Th17 nTPM: 33.1
Samples: 4
Max nTPM: 41.4
Min nTPM: 22.9
RHH5303_R3669
41.4
RHH5211_R3582
38.6
RHH5239_R3611
29.3
RHH5268_R3640
22.9
Memory CD4 T-cell Th17 nTPM: 35.1
Samples: 4
Max nTPM: 47.4
Min nTPM: 24.2
RHH5304_R3670
32.9
RHH5212_R3583
35.7
RHH5240_R3612
47.4
RHH5269_R3641
24.2
Memory CD4 T-cell Th2 nTPM: 34.3
Samples: 4
Max nTPM: 37.7
Min nTPM: 30.6
RHH5305_R3671
35.8
RHH5213_R3584
37.7
RHH5241_R3613
30.6
RHH5270_R3642
33.1
Naive CD4 T-cell nTPM: 25.3
Samples: 4
Max nTPM: 28.5
Min nTPM: 18.9
RHH5306_R3672
28.5
RHH5214_R3585
25.8
RHH5242_R3614
18.9
RHH5271_R3643
27.8
Naive CD8 T-cell nTPM: 24.6
Samples: 4
Max nTPM: 29.7
Min nTPM: 18.0
RHH5201_R3572
29.7
RHH5229_R3601
18.0
RHH5258_R3630
26.0
RHH5287_R3659
24.7
Non-Vd2 gdTCR nTPM: 31.0
Samples: 4
Max nTPM: 32.6
Min nTPM: 28.6
RHH5235_R3607
28.6
RHH5264_R3636
31.2
RHH5207_R3578
31.7
RHH5299_R3665
32.6
T-reg nTPM: 29.4
Samples: 4
Max nTPM: 30.4
Min nTPM: 28.4
RHH5301_R3667
30.4
RHH5237_R3609
30.1
RHH5266_R3638
28.4
RHH5209_R3580
28.7
Terminal effector memory CD4 T-cell nTPM: 26.9
Samples: 2
Max nTPM: 31.4
Min nTPM: 22.3
RHH5243_R3615
22.3
RHH5272_R3644
31.4
Terminal effector memory CD8 T-cell nTPM: 39.5
Samples: 4
Max nTPM: 54.7
Min nTPM: 32.0
RHH5232_R3604
32.0
RHH5204_R3575
54.7
RHH5261_R3633
33.7
RHH5296_R3662
37.5
Vd2 gdTCR nTPM: 36.5
Samples: 4
Max nTPM: 45.1
Min nTPM: 30.3
RHH5234_R3606
30.3
RHH5206_R3577
45.1
RHH5263_R3635
33.5
RHH5298_R3664
37.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
