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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
130.7
nTPM
Monaco:
47.8
nTPM
Schmiedel:
15.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
130.7
HPA sample
nTPM
gdT-cell nTPM: 107.3
Samples: 6
Max nTPM: 142.3
Min nTPM: 80.6
P10809_1007
86.7
P10809_1022
108.4
P10809_1041
142.3
P10809_1060
80.6
P10809_1077
121.5
P10809_1098
104.5
MAIT T-cell nTPM: 108.0
Samples: 6
Max nTPM: 168.9
Min nTPM: 65.1
P10809_1006
65.1
P10809_1024
110.9
P10809_1043
114.3
P10809_1062
93.2
P10809_1083
95.8
P10809_1097
168.9
Memory CD4 T-cell nTPM: 130.7
Samples: 6
Max nTPM: 159.9
Min nTPM: 91.1
P10809_1014
91.1
P10809_1026
159.9
P10809_1045
127.6
P10809_1064
119.9
P10809_1086
142.1
P10809_1113
143.7
Memory CD8 T-cell nTPM: 117.2
Samples: 5
Max nTPM: 144.2
Min nTPM: 84.4
P10809_1012
84.4
P10809_1027
120.2
P10809_1046
144.2
P10809_1065
107.2
P10809_1111
129.9
Naive CD4 T-cell nTPM: 81.4
Samples: 6
Max nTPM: 99.6
Min nTPM: 54.7
P10809_1015
54.7
P10809_1030
99.6
P10809_1049
90.3
P10809_1068
63.7
P10809_1085
93.9
P10809_1112
86.0
Naive CD8 T-cell nTPM: 89.2
Samples: 6
Max nTPM: 131.2
Min nTPM: 62.8
P10809_1016
62.8
P10809_1031
106.7
P10809_1050
94.2
P10809_1069
69.5
P10809_1087
131.2
P10809_1110
70.5
T-reg nTPM: 125.7
Samples: 6
Max nTPM: 153.7
Min nTPM: 73.4
P10809_1018
73.4
P10809_1037
116.5
P10809_1056
140.8
P10809_1075
125.4
P10809_1094
144.5
P10809_1106
153.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.7
Samples: 4
Max nTPM: 43.5
Min nTPM: 26.4
RHH5202_R3573
26.4
RHH5230_R3602
43.5
RHH5259_R3631
37.7
RHH5288_R3660
31.3
Effector memory CD8 T-cell nTPM: 33.5
Samples: 4
Max nTPM: 46.4
Min nTPM: 17.6
RHH5203_R3574
17.6
RHH5231_R3603
37.3
RHH5260_R3632
46.4
RHH5289_R3661
32.5
MAIT T-cell nTPM: 40.1
Samples: 4
Max nTPM: 44.4
Min nTPM: 34.0
RHH5233_R3605
34.0
RHH5205_R3576
39.9
RHH5262_R3634
44.4
RHH5297_R3663
41.9
Memory CD4 T-cell TFH nTPM: 36.8
Samples: 4
Max nTPM: 43.4
Min nTPM: 29.2
RHH5300_R3666
38.7
RHH5236_R3608
43.4
RHH5265_R3637
29.2
RHH5208_R3579
35.7
Memory CD4 T-cell Th1 nTPM: 36.2
Samples: 4
Max nTPM: 47.2
Min nTPM: 25.7
RHH5210_R3581
25.7
RHH5302_R3668
35.4
RHH5238_R3610
47.2
RHH5267_R3639
36.4
Memory CD4 T-cell Th1/Th17 nTPM: 47.8
Samples: 4
Max nTPM: 67.8
Min nTPM: 35.6
RHH5303_R3669
67.8
RHH5211_R3582
41.9
RHH5239_R3611
35.6
RHH5268_R3640
46.0
Memory CD4 T-cell Th17 nTPM: 34.5
Samples: 4
Max nTPM: 38.0
Min nTPM: 28.5
RHH5304_R3670
38.0
RHH5212_R3583
28.5
RHH5240_R3612
36.8
RHH5269_R3641
34.6
Memory CD4 T-cell Th2 nTPM: 41.1
Samples: 4
Max nTPM: 50.0
Min nTPM: 31.3
RHH5305_R3671
50.0
RHH5213_R3584
35.7
RHH5241_R3613
47.4
RHH5270_R3642
31.3
Naive CD4 T-cell nTPM: 28.4
Samples: 4
Max nTPM: 31.6
Min nTPM: 24.7
RHH5306_R3672
30.9
RHH5214_R3585
26.2
RHH5242_R3614
31.6
RHH5271_R3643
24.7
Naive CD8 T-cell nTPM: 30.7
Samples: 4
Max nTPM: 39.6
Min nTPM: 25.3
RHH5201_R3572
32.3
RHH5229_R3601
39.6
RHH5258_R3630
25.3
RHH5287_R3659
25.7
Non-Vd2 gdTCR nTPM: 40.1
Samples: 4
Max nTPM: 45.8
Min nTPM: 33.7
RHH5235_R3607
42.8
RHH5264_R3636
38.2
RHH5207_R3578
33.7
RHH5299_R3665
45.8
T-reg nTPM: 30.7
Samples: 4
Max nTPM: 39.6
Min nTPM: 22.9
RHH5301_R3667
39.6
RHH5237_R3609
30.6
RHH5266_R3638
22.9
RHH5209_R3580
29.5
Terminal effector memory CD4 T-cell nTPM: 31.7
Samples: 2
Max nTPM: 34.8
Min nTPM: 28.5
RHH5243_R3615
34.8
RHH5272_R3644
28.5
Terminal effector memory CD8 T-cell nTPM: 42.6
Samples: 4
Max nTPM: 53.7
Min nTPM: 29.9
RHH5232_R3604
29.9
RHH5204_R3575
53.7
RHH5261_R3633
52.3
RHH5296_R3662
34.3
Vd2 gdTCR nTPM: 41.2
Samples: 4
Max nTPM: 55.6
Min nTPM: 31.5
RHH5234_R3606
31.5
RHH5206_R3577
55.6
RHH5263_R3635
38.3
RHH5298_R3664
39.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
