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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.9
nTPM
Monaco:
45.5
nTPM
Schmiedel:
96.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.9
HPA sample
nTPM
gdT-cell nTPM: 63.3
Samples: 6
Max nTPM: 104.0
Min nTPM: 44.6
P10809_1007
44.6
P10809_1022
76.7
P10809_1041
104.0
P10809_1060
52.5
P10809_1077
49.6
P10809_1098
52.5
MAIT T-cell nTPM: 96.0
Samples: 6
Max nTPM: 136.2
Min nTPM: 43.6
P10809_1006
43.6
P10809_1024
131.4
P10809_1043
122.0
P10809_1062
71.6
P10809_1083
70.9
P10809_1097
136.2
Memory CD4 T-cell nTPM: 82.6
Samples: 6
Max nTPM: 109.8
Min nTPM: 42.2
P10809_1014
42.2
P10809_1026
109.8
P10809_1045
95.6
P10809_1064
61.8
P10809_1086
89.3
P10809_1113
96.8
Memory CD8 T-cell nTPM: 77.5
Samples: 5
Max nTPM: 90.5
Min nTPM: 41.3
P10809_1012
41.3
P10809_1027
81.3
P10809_1046
90.5
P10809_1065
86.5
P10809_1111
88.1
Naive CD4 T-cell nTPM: 81.7
Samples: 6
Max nTPM: 113.1
Min nTPM: 41.0
P10809_1015
41.0
P10809_1030
78.7
P10809_1049
113.1
P10809_1068
82.2
P10809_1085
100.9
P10809_1112
74.2
Naive CD8 T-cell nTPM: 86.3
Samples: 6
Max nTPM: 120.0
Min nTPM: 54.3
P10809_1016
54.3
P10809_1031
120.0
P10809_1050
107.3
P10809_1069
78.8
P10809_1087
82.5
P10809_1110
75.0
T-reg nTPM: 72.2
Samples: 6
Max nTPM: 102.7
Min nTPM: 34.6
P10809_1018
34.6
P10809_1037
79.8
P10809_1056
85.2
P10809_1075
51.5
P10809_1094
79.4
P10809_1106
102.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.1
Samples: 4
Max nTPM: 58.3
Min nTPM: 28.0
RHH5202_R3573
42.9
RHH5230_R3602
35.0
RHH5259_R3631
28.0
RHH5288_R3660
58.3
Effector memory CD8 T-cell nTPM: 24.3
Samples: 4
Max nTPM: 32.4
Min nTPM: 11.7
RHH5203_R3574
21.1
RHH5231_R3603
32.4
RHH5260_R3632
32.1
RHH5289_R3661
11.7
MAIT T-cell nTPM: 43.1
Samples: 4
Max nTPM: 59.0
Min nTPM: 27.5
RHH5233_R3605
35.1
RHH5205_R3576
27.5
RHH5262_R3634
59.0
RHH5297_R3663
50.7
Memory CD4 T-cell TFH nTPM: 40.8
Samples: 4
Max nTPM: 74.1
Min nTPM: 20.5
RHH5300_R3666
32.3
RHH5236_R3608
74.1
RHH5265_R3637
36.1
RHH5208_R3579
20.5
Memory CD4 T-cell Th1 nTPM: 41.1
Samples: 4
Max nTPM: 49.4
Min nTPM: 36.5
RHH5210_R3581
36.5
RHH5302_R3668
49.4
RHH5238_R3610
40.5
RHH5267_R3639
37.9
Memory CD4 T-cell Th1/Th17 nTPM: 40.7
Samples: 4
Max nTPM: 56.8
Min nTPM: 24.0
RHH5303_R3669
56.8
RHH5211_R3582
46.8
RHH5239_R3611
24.0
RHH5268_R3640
35.0
Memory CD4 T-cell Th17 nTPM: 33.4
Samples: 4
Max nTPM: 71.5
Min nTPM: 16.5
RHH5304_R3670
25.4
RHH5212_R3583
71.5
RHH5240_R3612
16.5
RHH5269_R3641
20.0
Memory CD4 T-cell Th2 nTPM: 32.3
Samples: 4
Max nTPM: 37.8
Min nTPM: 25.2
RHH5305_R3671
37.6
RHH5213_R3584
25.2
RHH5241_R3613
37.8
RHH5270_R3642
28.5
Naive CD4 T-cell nTPM: 40.4
Samples: 4
Max nTPM: 60.2
Min nTPM: 27.7
RHH5306_R3672
45.0
RHH5214_R3585
60.2
RHH5242_R3614
27.7
RHH5271_R3643
28.8
Naive CD8 T-cell nTPM: 36.2
Samples: 4
Max nTPM: 42.3
Min nTPM: 33.2
RHH5201_R3572
34.9
RHH5229_R3601
34.3
RHH5258_R3630
42.3
RHH5287_R3659
33.2
Non-Vd2 gdTCR nTPM: 39.4
Samples: 4
Max nTPM: 56.1
Min nTPM: 29.5
RHH5235_R3607
29.7
RHH5264_R3636
56.1
RHH5207_R3578
29.5
RHH5299_R3665
42.4
T-reg nTPM: 45.5
Samples: 4
Max nTPM: 53.8
Min nTPM: 32.8
RHH5301_R3667
50.1
RHH5237_R3609
53.8
RHH5266_R3638
45.2
RHH5209_R3580
32.8
Terminal effector memory CD4 T-cell nTPM: 30.3
Samples: 2
Max nTPM: 46.7
Min nTPM: 13.8
RHH5243_R3615
13.8
RHH5272_R3644
46.7
Terminal effector memory CD8 T-cell nTPM: 39.0
Samples: 4
Max nTPM: 56.8
Min nTPM: 18.2
RHH5232_R3604
18.2
RHH5204_R3575
51.3
RHH5261_R3633
29.7
RHH5296_R3662
56.8
Vd2 gdTCR nTPM: 44.4
Samples: 4
Max nTPM: 52.5
Min nTPM: 35.7
RHH5234_R3606
35.7
RHH5206_R3577
52.5
RHH5263_R3635
37.3
RHH5298_R3664
51.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
