We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
50.2
nTPM
Monaco:
236.2
nTPM
Schmiedel:
39.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
50.2
HPA sample
nTPM
gdT-cell nTPM: 3.4
Samples: 6
Max nTPM: 7.9
Min nTPM: 1.0
P10809_1007
3.6
P10809_1022
1.0
P10809_1041
5.4
P10809_1060
1.2
P10809_1077
1.2
P10809_1098
7.9
MAIT T-cell nTPM: 50.2
Samples: 6
Max nTPM: 85.8
Min nTPM: 28.9
P10809_1006
85.8
P10809_1024
54.5
P10809_1043
45.5
P10809_1062
47.0
P10809_1083
39.4
P10809_1097
28.9
Memory CD4 T-cell nTPM: 7.9
Samples: 6
Max nTPM: 11.8
Min nTPM: 2.2
P10809_1014
11.8
P10809_1026
11.3
P10809_1045
8.9
P10809_1064
2.2
P10809_1086
5.7
P10809_1113
7.5
Memory CD8 T-cell nTPM: 7.2
Samples: 5
Max nTPM: 14.1
Min nTPM: 2.1
P10809_1012
7.8
P10809_1027
2.1
P10809_1046
14.1
P10809_1065
4.1
P10809_1111
8.1
Naive CD4 T-cell nTPM: 0.0
Samples: 6
Max nTPM: 0.1
Min nTPM: 0.0
P10809_1015
0.1
P10809_1030
0.0
P10809_1049
0.0
P10809_1068
0.0
P10809_1085
0.0
P10809_1112
0.0
Naive CD8 T-cell nTPM: 0.0
Samples: 6
Max nTPM: 0.0
Min nTPM: 0.0
P10809_1016
0.0
P10809_1031
0.0
P10809_1050
0.0
P10809_1069
0.0
P10809_1087
0.0
P10809_1110
0.0
T-reg nTPM: 5.8
Samples: 6
Max nTPM: 8.9
Min nTPM: 2.5
P10809_1018
6.7
P10809_1037
7.5
P10809_1056
5.7
P10809_1075
3.4
P10809_1094
8.9
P10809_1106
2.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.6
Samples: 4
Max nTPM: 38.5
Min nTPM: 10.1
RHH5202_R3573
14.8
RHH5230_R3602
38.5
RHH5259_R3631
10.1
RHH5288_R3660
10.9
Effector memory CD8 T-cell nTPM: 8.4
Samples: 4
Max nTPM: 14.2
Min nTPM: 2.5
RHH5203_R3574
10.8
RHH5231_R3603
2.5
RHH5260_R3632
5.9
RHH5289_R3661
14.2
MAIT T-cell nTPM: 236.2
Samples: 4
Max nTPM: 304.6
Min nTPM: 193.1
RHH5233_R3605
220.9
RHH5205_R3576
304.6
RHH5262_R3634
193.1
RHH5297_R3663
226.2
Memory CD4 T-cell TFH nTPM: 21.3
Samples: 4
Max nTPM: 33.6
Min nTPM: 13.9
RHH5300_R3666
33.6
RHH5236_R3608
16.9
RHH5265_R3637
20.9
RHH5208_R3579
13.9
Memory CD4 T-cell Th1 nTPM: 3.3
Samples: 4
Max nTPM: 10.6
Min nTPM: 0.0
RHH5210_R3581
1.5
RHH5302_R3668
10.6
RHH5238_R3610
0.0
RHH5267_R3639
0.9
Memory CD4 T-cell Th1/Th17 nTPM: 83.9
Samples: 4
Max nTPM: 104.9
Min nTPM: 65.1
RHH5303_R3669
96.4
RHH5211_R3582
104.9
RHH5239_R3611
65.1
RHH5268_R3640
69.0
Memory CD4 T-cell Th17 nTPM: 123.8
Samples: 4
Max nTPM: 156.2
Min nTPM: 108.1
RHH5304_R3670
156.2
RHH5212_R3583
114.5
RHH5240_R3612
108.1
RHH5269_R3641
116.2
Memory CD4 T-cell Th2 nTPM: 1.9
Samples: 4
Max nTPM: 4.7
Min nTPM: 0.0
RHH5305_R3671
1.3
RHH5213_R3584
4.7
RHH5241_R3613
0.0
RHH5270_R3642
1.6
Naive CD4 T-cell nTPM: 1.5
Samples: 4
Max nTPM: 3.7
Min nTPM: 0.2
RHH5306_R3672
1.8
RHH5214_R3585
0.4
RHH5242_R3614
0.2
RHH5271_R3643
3.7
Naive CD8 T-cell nTPM: 0.1
Samples: 4
Max nTPM: 0.5
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
0.0
RHH5258_R3630
0.5
RHH5287_R3659
0.0
Non-Vd2 gdTCR nTPM: 5.7
Samples: 4
Max nTPM: 19.8
Min nTPM: 0.0
RHH5235_R3607
19.8
RHH5264_R3636
0.0
RHH5207_R3578
0.3
RHH5299_R3665
2.5
T-reg nTPM: 16.1
Samples: 4
Max nTPM: 25.6
Min nTPM: 8.1
RHH5301_R3667
14.7
RHH5237_R3609
15.9
RHH5266_R3638
8.1
RHH5209_R3580
25.6
Terminal effector memory CD4 T-cell nTPM: 2.9
Samples: 2
Max nTPM: 3.6
Min nTPM: 2.1
RHH5243_R3615
3.6
RHH5272_R3644
2.1
Terminal effector memory CD8 T-cell nTPM: 0.3
Samples: 4
Max nTPM: 1.3
Min nTPM: 0.0
RHH5232_R3604
1.3
RHH5204_R3575
0.0
RHH5261_R3633
0.0
RHH5296_R3662
0.0
Vd2 gdTCR nTPM: 11.5
Samples: 4
Max nTPM: 23.3
Min nTPM: 0.4
RHH5234_R3606
17.3
RHH5206_R3577
4.9
RHH5263_R3635
0.4
RHH5298_R3664
23.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
